RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SVOPLQ8N434 492 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 ZNF525Q8N782 197 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 SLC30A7Q8NEW0 376 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 OR10H5Q8NGA6 315 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 OR1J2Q8NGS2 313 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 FAM168AQ92567 244 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 SORCS2Q96PQ0 1159 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 RAB1BQ9H0U4 201 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 CDH20Q9HBT6 801 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 CCNB1IP1Q9NPC3 277 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 SLC7A8Q9UHI5 535 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 UGT2A1Q9Y4X1 527 aa14.02□□□□□ -0.17
COL1A1-202ENST00000463440 IGHV4-30-2A0A087WSY4 118 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 IGKV1D-43A0A0B4J1Z2 117 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 SLC22A23A1A5C7 686 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 XKRYO14609 159 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 NDUFB2O95178 105 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 SLC25A16P16260 332 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 CALB2P22676 271 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 OMPP47874 163 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 LIMS1P48059 325 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 HSF2Q03933 536 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 SEC23BQ15437 767 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 TBC1D28Q2M2D7 210 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 IQCCQ4KMZ1 466 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 MAPK1IP1LQ8NDC0 245 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 MRPL24Q96A35 216 aaKnown RBP14.01□□□□□ -0.17
COL1A1-202ENST00000463440 NABP1Q96AH0 204 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 RSRC1Q96IZ7 334 aaKnown RBP14.01□□□□□ -0.17
COL1A1-202ENST00000463440 ZNF570Q96NI8 536 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 DOK1Q99704 481 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 LRMDAQ9H2I8 198 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 DYNLRB1Q9NP97 96 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 IL1RAPQ9NPH3 570 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 ACTR3BQ9P1U1 418 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 SIGLEC7Q9Y286 467 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 ADAM18Q9Y3Q7 739 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 CSPG4Q6UVK1 2322 aa14.01□□□□□ -0.17
COL1A1-202ENST00000463440 NF1P21359 2839 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 TMEM129A0AVI4 362 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 SH3PXD2BA1X283 911 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 UNC119BA6NIH7 251 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 AHCYL1O43865 530 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 GPRIN2O60269 458 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 PTP4A3O75365 173 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 TP53P04637 393 aaPredicted RBP14□□□□□ -0.17
COL1A1-202ENST00000463440 MMP7P09237 267 aaPredicted RBP14□□□□□ -0.17
COL1A1-202ENST00000463440 ZNF26P17031 533 aaPredicted RBP14□□□□□ -0.17
COL1A1-202ENST00000463440 EVX1P49640 407 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 MTX3Q5HYI7 312 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 FAM27BQ5VT28 67 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 GPR139Q6DWJ6 353 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 ZDHHC21Q8IVQ6 265 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 CLDN22Q8N7P3 220 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 Q96M85 177 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 FUZQ9BT04 418 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 MUC13Q9H3R2 512 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 MYOZ1Q9NP98 299 aaPredicted RBP14□□□□□ -0.17
COL1A1-202ENST00000463440 ADAM21Q9UKJ8 722 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 TMCC3Q9ULS5 477 aa14□□□□□ -0.17
COL1A1-202ENST00000463440 A0A1W2PPL8 197 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 H7C1C5 153 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 LY6HO94772 140 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 SNAP29O95721 258 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 CST2P09228 141 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 HOXB4P17483 251 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-202ENST00000463440 RRM2P31350 389 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 APLNRP35414 380 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 IFNGR2P38484 337 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 PDLIM4P50479 330 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 PCBD1P61457 104 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 LCN6P62502 163 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 PABPC1L2AQ5JQF8 200 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 CYP2R1Q6VVX0 501 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 FOXL2NBQ6ZUU3 175 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 FAM122BQ7Z309 247 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 C10orf105Q8TEF2 133 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 NEU4Q8WWR8 484 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-202ENST00000463440 POM121Q96HA1 1249 aa13.99□□□□□ -0.17
COL1A1-202ENST00000463440 GPX7Q96SL4 187 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-202ENST00000463440 MRPL37Q9BZE1 423 aaKnown RBP13.99□□□□□ -0.17
COL1A1-202ENST00000463440 NIPBLQ6KC79 2804 aaeCLIP13.99□□□□□ -0.17
COL1A1-202ENST00000463440 TLN2Q9Y4G6 2542 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 TEX13CA0A0J9YWL9 993 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 PRSS37A4D1T9 235 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 NDUFS8O00217 210 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 SYNGR3O43761 229 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 OR10H3O60404 316 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 CCL2P13500 99 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 ZNF32P17041 273 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 MSR1P21757 451 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 APEX1P27695 318 aaKnown RBP13.98□□□□□ -0.17
COL1A1-202ENST00000463440 LAP3P28838 519 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 SDHAP31040 664 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 RPS6KA3P51812 740 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 PPP2R2BQ00005 443 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 KRR1Q13601 381 aaKnown RBP13.98□□□□□ -0.17
COL1A1-202ENST00000463440 MESTQ5EB52 335 aa13.98□□□□□ -0.17
COL1A1-202ENST00000463440 RGS7BPQ6MZT1 257 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-202ENST00000463440 SMARCD3Q6STE5 483 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms