RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 IQCMA0A1B0GVH7 501 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 A0A1W2PPW3 197 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 A6NIZ1 184 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 A8MV72 311 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 H7C1C5 153 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 CDC42EP2O14613 210 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 SYNGR3O43761 229 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 MGRN1O60291 552 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 CRLF1O75462 422 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 GMNNO75496 209 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 DCTN3O75935 186 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 SNAP29O95721 258 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 PTHP01270 115 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 H1F0P07305 194 aaKnown RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 IGFBP1P08833 259 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 ADRA2AP08913 450 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 MMP7P09237 267 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 FAM157BP0CG42 384 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 CCL2P13500 99 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 DAOP14920 347 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 TCN1P20061 433 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 APLNRP35414 380 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 RPL4P36578 427 aaKnown RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 ALDH3B1P43353 468 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 NR4A2P43354 598 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 EVX1P49640 407 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 RAP1BP61224 184 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 LCN6P62502 163 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 RAP1AP62834 184 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 PLP2Q04941 152 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 FHL1Q13642 323 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 MAD2L1BPQ15013 274 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 GLYATQ6IB77 296 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 RGS7BPQ6MZT1 257 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 SLC25A47Q6Q0C1 308 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 TBPL2Q6SJ96 375 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 TMPRSS11FQ6ZWK6 438 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 RRM2BQ7LG56 351 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 PRIMA1Q86XR5 153 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 PGAM4Q8N0Y7 254 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF570Q96NI8 536 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 LRRC37BQ96QE4 947 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 BPESC1Q9GZL8 116 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 KCNN2Q9H2S1 579 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 OR51B6Q9H340 312 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 NMNAT1Q9HAN9 279 aaPredicted RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 SIAEQ9HAT2 523 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 CCNB1IP1Q9NPC3 277 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 DCAF13Q9NV06 445 aaKnown RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 NDUFAF4Q9P032 175 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 MYEF2Q9P2K5 600 aaKnown RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 TAGLN3Q9UI15 199 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 FZR1Q9UM11 496 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 ARL2BPQ9Y2Y0 163 aa8.75□□□□□ -1.01
SF3A3-204ENST00000462258 FAM32AQ9Y421 112 aaKnown RBP8.75□□□□□ -1.01
SF3A3-204ENST00000462258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.75□□□□□ -1.011e-6■■■□□ 17.2
SF3A3-204ENST00000462258 IGHV4-61A0A0C4DH41 118 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 TRBV4-1A0A0J9YWV2 114 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 A0A1W2PPL8 197 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 A0A1W2PRQ8 180 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 SLC22A23A1A5C7 686 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 DIRAS1O95057 198 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 STAMBPO95630 424 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 CD14P08571 375 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 IGHV4-31P0DP07 118 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 HSD17B1P14061 328 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ZNF32P17041 273 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 RHCEP18577 417 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 APEX1P27695 318 aaKnown RBP8.74□□□□□ -1.01
SF3A3-204ENST00000462258 LIMS1P48059 325 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 GZMKP49863 264 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ERVK-25P63136 954 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 KRR1Q13601 381 aaKnown RBP8.74□□□□□ -1.01
SF3A3-204ENST00000462258 DGCR6Q14129 220 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ZBED5Q49AG3 693 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 IQCCQ4KMZ1 466 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 MESTQ5EB52 335 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 PABPC1L2AQ5JQF8 200 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 SAMD4BQ5PRF9 694 aaKnown RBP8.74□□□□□ -1.01
SF3A3-204ENST00000462258 THEM4Q5T1C6 240 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 PODNL1Q6PEZ8 512 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 LRP11Q86VZ4 500 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ARIH2OSQ8N7S6 290 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ICA1LQ8NDH6 482 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 OR1J2Q8NGS2 313 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 C7orf34Q96L11 122 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 FOXN4Q96NZ1 517 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 RBP7Q96R05 134 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 LRMDAQ9H2I8 198 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 GORASP2Q9H8Y8 452 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 KRCC1Q9NPI7 259 aaPredicted RBP8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ARL8BQ9NVJ2 186 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 REV1Q9UBZ9 1251 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 DUSP13Q9UII6 198 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 METRNQ9UJH8 293 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ADAM21Q9UKJ8 722 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 ADAM18Q9Y3Q7 739 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 SVEP1Q4LDE5 3571 aa8.74□□□□□ -1.01
SF3A3-204ENST00000462258 MALRD1Q5VYJ5 2156 aa8.73□□□□□ -1.01
SF3A3-204ENST00000462258 XKRYO14609 159 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms