RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GSK3BP49841 420 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 CHN2P52757 468 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 RPL27P61353 136 aaKnown RBP16.25■□□□□ 0.19
VARS-220ENST00000461874 PRKCDQ05655 676 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 FMODQ06828 376 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 CD47Q08722 323 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 TOP3AQ13472 1001 aaPredicted RBP16.25■□□□□ 0.19
VARS-220ENST00000461874 FHL1Q13642 323 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 TBC1D28Q2M2D7 210 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 IFI44LQ53G44 452 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 ELFN2Q5R3F8 820 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 SLC25A47Q6Q0C1 308 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 MEX3DQ86XN8 651 aaKnown RBP16.25■□□□□ 0.19
VARS-220ENST00000461874 LRRC75AQ8NAA5 344 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 HPS1Q92902 700 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 NABP1Q96AH0 204 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 ALG12Q9BV10 488 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 LRMDAQ9H2I8 198 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 KCNN2Q9H2S1 579 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 CHODLQ9H9P2 273 aa16.25■□□□□ 0.19
VARS-220ENST00000461874 ZNF346Q9UL40 294 aaKnown RBP16.25■□□□□ 0.19
VARS-220ENST00000461874 A0A1W2PPW3 197 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 GMNCA6NCL1 334 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 PRSS23O95084 383 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 IGHMP01871 453 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 HPXP02790 462 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 SAGP10523 405 aaPredicted RBP16.24■□□□□ 0.19
VARS-220ENST00000461874 ZNF250P15622 560 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 IL2RGP31785 369 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 RAD52P43351 418 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 UCP2P55851 309 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 CTXN1P60606 82 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 HSF2Q03933 536 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 ANKDD1AQ495B1 522 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 PABPC1L2AQ5JQF8 200 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 THEM4Q5T1C6 240 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 RNF113BQ8IZP6 322 aaKnown RBP16.24■□□□□ 0.19
VARS-220ENST00000461874 CPEB3Q8NE35 698 aaKnown RBP16.24■□□□□ 0.19
VARS-220ENST00000461874 OR51A7Q8NH64 312 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 ZNF519Q8TB69 540 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 ACOT11Q8WXI4 607 aaPredicted RBP16.24■□□□□ 0.19
VARS-220ENST00000461874 NSMAFQ92636 917 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 HSH2DQ96JZ2 352 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 RBP7Q96R05 134 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 SNX18Q96RF0 628 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 OR51B6Q9H340 312 aa16.24■□□□□ 0.19
VARS-220ENST00000461874 IGLV3-9A0A075B6K5 115 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 TRAV27A0A087WT01 109 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 A0A087WUU8 490 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 EFCAB9A8MZ26 197 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 NDUFAB1O14561 156 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 CLPTM1O96005 669 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 SERPINA1P01009 418 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 LCKP06239 509 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 NAT2P11245 290 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 COL8A2P25067 703 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 APEX1P27695 318 aaKnown RBP16.23■□□□□ 0.19
VARS-220ENST00000461874 APLNRP35414 380 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 NUDT2P50583 147 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 SELENOVP59797 346 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 TRIP10Q15642 601 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 SGCAQ16586 387 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 FAM120AOSQ5T036 256 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 FAM205BPQ63HN1 556 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 TBPL2Q6SJ96 375 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 FKBP9P1Q75LS8 142 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 OAFQ86UD1 273 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 IGFN1Q86VF2 1251 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 CLDN22Q8N7P3 220 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 SYNPRQ8TBG9 265 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 FNDC8Q8TC99 324 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 C11orf40Q8WZ69 217 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 RDH5Q92781 318 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 BCL2L14Q9BZR8 327 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 CCNB1IP1Q9NPC3 277 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 TAAR3PQ9P1P4 343 aa16.23■□□□□ 0.19
VARS-220ENST00000461874 RNF212BA8MTL3 300 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 ZNF32P17041 273 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 SLC9A3P48764 834 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 KLF3P57682 345 aaPredicted RBP16.22■□□□□ 0.19
VARS-220ENST00000461874 ERVS71-1P61550 626 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 NKPD1Q17RQ9 610 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 FAM27BQ5VT28 67 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 ZNF730Q6ZMV8 503 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 MBOAT2Q6ZWT7 520 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 TSEN54Q7Z6J9 526 aaKnown RBP16.22■□□□□ 0.19
VARS-220ENST00000461874 OR13C2Q8NGS9 318 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 C1orf159Q96HA4 380 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 TSPAN32Q96QS1 320 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 KCTD14Q9BQ13 255 aaPredicted RBP16.22■□□□□ 0.19
VARS-220ENST00000461874 ELAC2Q9BQ52 826 aaKnown RBP16.22■□□□□ 0.19
VARS-220ENST00000461874 MYLK2Q9H1R3 596 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 ABCD2Q9UBJ2 740 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 GPR160Q9UJ42 338 aa16.22■□□□□ 0.19
VARS-220ENST00000461874 A6NIZ1 184 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 NCR1O76036 304 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 NCK1P16333 377 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 SRD5A1P18405 259 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 ACHEP22303 614 aa16.21■□□□□ 0.19
VARS-220ENST00000461874 STOMP27105 288 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms