RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 RNF165Q6ZSG1 346 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 ANKRD46Q86W74 232 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 UEVLDQ8IX04 471 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 PEX5LQ8IYB4 626 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 CNPY4Q8N129 248 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 MIER2Q8N344 545 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 LILRB2Q8N423 598 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 SPICQ8N5J4 248 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 DEFB108BQ8NET1 73 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 SLC30A7Q8NEW0 376 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 OR52E2Q8NGJ4 325 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 OR6N1Q8NGY5 312 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 MFSD8Q8NHS3 518 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 FAM110DQ8TAY7 271 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-206ENST00000461574 MIPOL1Q8TD10 442 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 TUBGCP3Q96CW5 907 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 COQ8BQ96D53 544 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 ZNF48Q96MX3 618 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-206ENST00000461574 OXGR1Q96P68 337 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 TSPAN32Q96QS1 320 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 OR2M2Q96R28 347 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 DCLRE1CQ96SD1 692 aaKnown RBP4.25□□□□□ -1.73
BRCA1-206ENST00000461574 FOXB1Q99853 325 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 CITED1Q99966 193 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 RBM4BQ9BQ04 359 aaKnown RBP4.25□□□□□ -1.73
BRCA1-206ENST00000461574 SLC35A5Q9BS91 424 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 LRMDAQ9H2I8 198 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 DENND2DQ9H6A0 471 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-206ENST00000461574 ARMC7Q9H6L4 198 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 RNF121Q9H920 327 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 NANOGQ9H9S0 305 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 MMP26Q9NRE1 261 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 B3GNT2Q9NY97 397 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 NKIRAS2Q9NYR9 191 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 PSMC3IPQ9P2W1 217 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-206ENST00000461574 RPS6KB2Q9UBS0 482 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 LEF1Q9UJU2 399 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-206ENST00000461574 EMCNQ9ULC0 261 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 MMP24Q9Y5R2 645 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 CACNG2Q9Y698 323 aa4.25□□□□□ -1.73
BRCA1-206ENST00000461574 TET2Q6N021 2002 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 MDFIC2A0A1B0GVS7 189 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 CLPSL1A2RUU4 121 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 CDHR4A6H8M9 788 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 ZNF726A6NNF4 738 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 RNASET2O00584 256 aaKnown RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 COPEO14579 308 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 GSTA4O15217 222 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 TRAF3IP2O43734 574 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 PLIN3O60664 434 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 FAM20BO75063 409 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 ERLIN1O75477 346 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 FARS2O95363 451 aaKnown RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 NGFP01138 241 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 PTHP01270 115 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 SERPINA5P05154 406 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 GUSBP08236 651 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 SBK2P0C263 348 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 GKN3PP0CG01 181 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 G6PDP11413 515 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 CCL2P13500 99 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 CCNOP22674 350 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 CBLP22681 906 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 LMO1P25800 156 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 P2RY4P51582 365 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 PMS2P3Q13401 168 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 LARS2Q15031 903 aaKnown RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 FAM189A2Q15884 450 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 SYPL1Q16563 259 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 TAF9Q16594 264 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 TBC1D28Q2M2D7 210 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 C2orf68Q2NKX9 166 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 LIN52Q52LA3 116 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 KLF17Q5JT82 389 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 C6orf136Q5SQH8 315 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 ANXA8L1Q5VT79 327 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 TMEM53Q6P2H8 277 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 BTNL3Q6UXE8 466 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 ZNF836Q6ZNA1 936 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 RNF130Q86XS8 419 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 C10orf107Q8IVU9 208 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 LRRC34Q8IZ02 419 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 TMEM123Q8N131 208 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 C10orf53Q8N6V4 93 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 TRIML2Q8N7C3 387 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 ANKFN1Q8N957 763 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 HIPK4Q8NE63 616 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 OR1J2Q8NGS2 313 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 OR1J1Q8NGS3 322 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 OR52P1PQ8NH57 321 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 ZNF519Q8TB69 540 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 PNPT1Q8TCS8 783 aaKnown RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 NEURL3Q96EH8 262 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 KTI12Q96EK9 354 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 SLC47A1Q96FL8 570 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 TRNT1Q96Q11 434 aaKnown RBP4.24□□□□□ -1.73
BRCA1-206ENST00000461574 GPHA2Q96T91 129 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 EMC6Q9BV81 110 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 BCL2L14Q9BZR8 327 aa4.24□□□□□ -1.73
BRCA1-206ENST00000461574 SLC38A1Q9H2H9 487 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms