RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 CDAP32320 146 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 THBS4P35443 961 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 IFNGR2P38484 337 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 OMPP47874 163 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 LIMS1P48059 325 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 EFNA4P52798 201 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 LCN6P62502 163 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 HSF2Q03933 536 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 HGFACQ04756 655 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 PLP2Q04941 152 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 ADIPOQQ15848 244 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 SGCAQ16586 387 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 SWI5Q1ZZU3 235 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 MST1LQ2TV78 715 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 NRN1LQ496H8 165 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 THEM4Q5T1C6 240 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 TRPM8Q7Z2W7 1104 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 CLDN22Q8N7P3 220 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 ARIH2OSQ8N7S6 290 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 ZNF519Q8TB69 540 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 FANK1Q8TC84 345 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 LRGUKQ96M69 825 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 ZNF442Q9H7R0 627 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 CDH20Q9HBT6 801 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 IL1RAPQ9NPH3 570 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 FKBP7Q9Y680 259 aa13.31□□□□□ -0.28
VARS-219ENST00000461328 IGKV1D-43A0A0B4J1Z2 117 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 TEX13CA0A0J9YWL9 993 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 IQCMA0A1B0GVH7 501 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 B9A039 149 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 SERPINA5P05154 406 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 CSF3P09919 207 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 T-ENOLP0DO92 83 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 ZNF133P52736 654 aaPredicted RBP13.3□□□□□ -0.28
VARS-219ENST00000461328 MRPS34P82930 218 aaKnown RBP13.3□□□□□ -0.28
VARS-219ENST00000461328 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 KRR1Q13601 381 aaKnown RBP13.3□□□□□ -0.28
VARS-219ENST00000461328 FHL1Q13642 323 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 SLC25A47Q6Q0C1 308 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 SLC30A7Q8NEW0 376 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 OR10H5Q8NGA6 315 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 FGFBP3Q8TAT2 258 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 FAM168AQ92567 244 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 NMD3Q96D46 503 aaKnown RBP13.3□□□□□ -0.28
VARS-219ENST00000461328 Q96M85 177 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 VRK1Q99986 396 aaPredicted RBP13.3□□□□□ -0.28
VARS-219ENST00000461328 SIAEQ9HAT2 523 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 DYNLRB1Q9NP97 96 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 IL20RAQ9UHF4 553 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 SIGLEC7Q9Y286 467 aa13.3□□□□□ -0.28
VARS-219ENST00000461328 LY6HO94772 140 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
VARS-219ENST00000461328 PTHP01270 115 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 NR4A1P22736 598 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 RPS23P62266 143 aaKnown RBP13.29□□□□□ -0.28
VARS-219ENST00000461328 TRIM25Q14258 630 aaKnown RBP13.29□□□□□ -0.28
VARS-219ENST00000461328 EFNB3Q15768 340 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 TBC1D28Q2M2D7 210 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 IQCCQ4KMZ1 466 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 MESTQ5EB52 335 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 LCN8Q6JVE9 175 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 SVOPLQ8N434 492 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 RASD2Q96D21 266 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 CLPTM1LQ96KA5 538 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 ZNF75AQ96N20 296 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 SORCS2Q96PQ0 1159 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 THTPAQ9BU02 230 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 TRIM15Q9C019 465 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 LRMDAQ9H2I8 198 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 C1orf198Q9H425 327 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 PLK3Q9H4B4 646 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 RERGLQ9H628 205 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 SLC7A8Q9UHI5 535 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 CMAHPQ9Y471 501 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 UGT2A1Q9Y4X1 527 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 CSPG4Q6UVK1 2322 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 FN1P02751 2386 aaKnown RBP13.29□□□□□ -0.28
VARS-219ENST00000461328 NAV3Q8IVL0 2385 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 HIVEP2P31629 2446 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 TLN2Q9Y4G6 2542 aa13.29□□□□□ -0.28
VARS-219ENST00000461328 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 SOCS2O14508 198 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 GPRIN2O60269 458 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 MGRN1O60291 552 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 UBOX5O94941 541 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 ERCC1P07992 297 aaPredicted RBP13.28□□□□□ -0.28
VARS-219ENST00000461328 ZNF35P13682 527 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 SLC25A16P16260 332 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 ZNF26P17031 533 aaPredicted RBP13.28□□□□□ -0.28
VARS-219ENST00000461328 SDHAP31040 664 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 APLNRP35414 380 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 RPS6KA3P51812 740 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 DNAL1Q4LDG9 190 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 FAM98BQ52LJ0 330 aaKnown RBP13.28□□□□□ -0.28
VARS-219ENST00000461328 GPR139Q6DWJ6 353 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 SMARCD3Q6STE5 483 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 THSD4Q6ZMP0 1018 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 ZNF584Q8IVC4 421 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 OR1J2Q8NGS2 313 aa13.28□□□□□ -0.28
VARS-219ENST00000461328 C10orf105Q8TEF2 133 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms