RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 SRMP19623 302 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 RAB5AP20339 215 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 SOX18P35713 384 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 DDOSTP39656 456 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 NTHL1P78549 312 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 BAMBIQ13145 260 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 EXT1Q16394 746 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 LEXMQ3ZCV2 418 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PIANPQ8IYJ0 282 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PGBD5Q8N414 524 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 C11orf40Q8WZ69 217 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 SLC7A6Q92536 515 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 ATOH8Q96SQ7 321 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 INSM2Q96T92 566 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 C11orf54Q9H0W9 315 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-205ENST00000461221 POLDIP2Q9Y2S7 368 aa8.29□□□□□ -1.08
BRCA1-205ENST00000461221 PRSS44E7EML9 344 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 G3V3Q6 166 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 TCN2P20062 427 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 PTGER1P34995 402 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 EMP3P54852 163 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 GRINAQ7Z429 371 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SCD5Q86SK9 330 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 LINC00346Q8IVM7 164 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 OR52I1Q8NGK6 324 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 DVL3Q92997 716 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 FAM103A1Q9BTL3 118 aaKnown RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 RNF186Q9NXI6 227 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 DBX1A6NMT0 343 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 RRP8O43159 456 aaKnown RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 GRPP07492 148 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 GNB1P62873 340 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 OR8G1Q15617 311 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SMN1Q16637 294 aaKnown RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SLC38A5Q8WUX1 472 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 CHAC2Q8WUX2 184 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 RAB6CQ9H0N0 254 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ACTL7AQ9Y615 435 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 A3GALT2U3KPV4 340 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 A0A1B0GWA3 101 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 UMAD1C9J7I0 102 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SMLR1H3BR10 107 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 RAB27BO00194 218 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 PTGESO14684 152 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 TO15178 435 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SMAD6O43541 496 aaKnown RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 GALR2O43603 387 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 YIF1AO95070 293 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 FBP1P09467 338 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 P2RX3P56373 397 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ERHP84090 104 aaKnown RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 IHHQ14623 411 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 BAK1Q16611 211 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ADAM5Q6NVV9 412 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 FAM71CQ8NEG0 241 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 OR4F5Q8NH21 305 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 HLA-CQ95604 372 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 TMEM18Q96B42 140 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 OR4F4Q96R69 305 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF629Q9UEG4 869 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 IGKV6-21A0A0C4DH24 114 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SOD1P00441 154 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 C1SP09871 688 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SLC35E2P0CK97 266 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SMIM17P0DL12 118 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 T-ENOLP0DO92 83 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 RPA2P15927 270 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ELAVL4P26378 380 aaKnown RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF252P-AS1Q0IIN9 211 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 MED25Q71SY5 747 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ANGPTL5Q86XS5 388 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF775Q96BV0 537 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 C3orf30Q96M34 536 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 CIB3Q96Q77 187 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 OR2A14Q96R47 310 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 DHRS4Q9BTZ2 278 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SLC25A32Q9H2D1 315 aa8.28□□□□□ -1.08
BRCA1-205ENST00000461221 COL1A1P02452 1464 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-205ENST00000461221 SH2D1BO14796 132 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 TCAPO15273 167 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 EIF4E2O60573 245 aaKnown RBP8.27□□□□□ -1.08
BRCA1-205ENST00000461221 RPL7P18124 248 aaKnown RBP8.27□□□□□ -1.08
BRCA1-205ENST00000461221 GPR12P47775 334 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 AMTP48728 403 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 CCR6P51684 374 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 MAT1AQ00266 395 aaKnown RBP8.27□□□□□ -1.08
BRCA1-205ENST00000461221 TRIM61Q5EBN2 209 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 PLAC9Q5JTB6 97 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 ZNF468Q5VIY5 522 aaPredicted RBP8.27□□□□□ -1.08
BRCA1-205ENST00000461221 PLXDC2Q6UX71 529 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 SSX7Q7RTT5 188 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 DCXRQ7Z4W1 244 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 MAML2Q8IZL2 1156 aaPredicted RBP8.27□□□□□ -1.08
BRCA1-205ENST00000461221 OR10X1Q8NGY0 326 aa8.27□□□□□ -1.08
BRCA1-205ENST00000461221 ELF4Q99607 663 aaPredicted RBP8.27□□□□□ -1.08
BRCA1-205ENST00000461221 CTDSP1Q9GZU7 261 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms