RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 SLC17A1Q14916 467 aa16.33■□□□□ 0.2
HPS3-202ENST00000460120 ANGPT1Q15389 498 aa16.33■□□□□ 0.2
HPS3-202ENST00000460120 NHLRC1Q6VVB1 395 aa16.33■□□□□ 0.2
HPS3-202ENST00000460120 ZNF767PQ75MW2 155 aa16.33■□□□□ 0.2
HPS3-202ENST00000460120 OR8B4Q96RC9 309 aa16.33■□□□□ 0.2
HPS3-202ENST00000460120 MFRPQ9BY79 579 aa16.33■□□□□ 0.2
HPS3-202ENST00000460120 ANKRD20A5PA0PJZ0 165 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ACOT7O00154 380 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 LMX1BO60663 402 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 RAB40ALP0C0E4 278 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 TSPAN5P62079 268 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 SGCBQ16585 318 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 OR10K2Q6IF99 312 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 LRFN4Q6PJG9 635 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 TEX261Q6UWH6 196 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ARSKQ6UWY0 536 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 TMPRSS9Q7Z410 1059 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 SLC38A9Q8NBW4 561 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 RAB40AQ8WXH6 277 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 NKD1Q969G9 470 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 CCNL2Q96S94 520 aaPredicted RBP16.32■□□□□ 0.2
HPS3-202ENST00000460120 EMC6Q9BV81 110 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ATG5Q9H1Y0 275 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 TAS2R4Q9NYW5 299 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 EMC9Q9Y3B6 208 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 U3KQ87 197 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 LOC101059948A0A1B0GTJ6 334 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 CPED1A4D0V7 1026 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ZBTB37Q5TC79 503 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 SLC18B1Q6NT16 456 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ZNF782Q6ZMW2 699 aaPredicted RBP16.32■□□□□ 0.2
HPS3-202ENST00000460120 FGD2Q7Z6J4 655 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ZNF680Q8NEM1 530 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 GPR137Q96N19 417 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ABHD6Q9BV23 337 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 PHF7Q9BWX1 381 aaPredicted RBP16.32■□□□□ 0.2
HPS3-202ENST00000460120 CENPMQ9NSP4 180 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 PRELID1Q9Y255 219 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 PYCARD-AS1I3L0S3 204 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 GLSO94925 669 aaPredicted RBP16.32■□□□□ 0.2
HPS3-202ENST00000460120 TIAF1O95411 115 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 OR3A3P47888 321 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 SPOCK1Q08629 439 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 RASGEF1BQ0VAM2 473 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 C2orf76Q3KRA6 126 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 OGFOD3Q6PK18 319 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 TMEM205Q6UW68 189 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ZNF627Q7L945 461 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 TDHQ8IZJ6 230 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 OR51A2Q8NGJ7 313 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 OR5M1Q8NGP8 315 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 NXPE2Q96DL1 559 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 ACTR6Q9GZN1 396 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 DHDHQ9UQ10 334 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 LRP12Q9Y561 859 aa16.32■□□□□ 0.2
HPS3-202ENST00000460120 SLC22A23A1A5C7 686 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 A8MVM7 634 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 IFNGR1P15260 489 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 LCN1P31025 176 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 ASPHD2Q6ICH7 369 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 STT3BQ8TCJ2 826 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 GINS4Q9BRT9 223 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 TTYH1Q9H313 450 aaPredicted RBP16.31■□□□□ 0.2
HPS3-202ENST00000460120 PLEKHA1Q9HB21 404 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 SLC22A11Q9NSA0 550 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 SUSD2Q9UGT4 822 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 ELF5Q9UKW6 265 aaPredicted RBP16.31■□□□□ 0.2
HPS3-202ENST00000460120 HRH3Q9Y5N1 445 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 TRBV5-7A0A0A0MS05 114 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 IGKV1D-43A0A0B4J1Z2 117 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 PLPP3O14495 311 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 CTAG2O75638 210 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 RBBP9O75884 186 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 MPC2O95563 127 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 RAF1P04049 648 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 GTF2F2P13984 249 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 DCAF7P61962 342 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 RNF4P78317 190 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 SNTA1Q13424 505 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 ZNF679Q8IYX0 411 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 D2HGDHQ8N465 521 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 OR4C16Q8NGL9 310 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 ZNF519Q8TB69 540 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 C8orf44Q96CB5 159 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 TXNIPQ9H3M7 391 aa16.31■□□□□ 0.2
HPS3-202ENST00000460120 MRPL39Q9NYK5 338 aaKnown RBP16.31■□□□□ 0.2
HPS3-202ENST00000460120 FREM3P0C091 2139 aa16.3■□□□□ 0.2
HPS3-202ENST00000460120 EIF4E2O60573 245 aaKnown RBP16.3■□□□□ 0.2
HPS3-202ENST00000460120 CFDP00746 253 aaPredicted RBP16.3■□□□□ 0.2
HPS3-202ENST00000460120 POU3F1Q03052 451 aaPredicted RBP16.3■□□□□ 0.2
HPS3-202ENST00000460120 RAB11BQ15907 218 aa16.3■□□□□ 0.2
HPS3-202ENST00000460120 BPHLQ86WA6 291 aaPredicted RBP16.3■□□□□ 0.2
HPS3-202ENST00000460120 FAM3DQ96BQ1 224 aa16.3■□□□□ 0.2
HPS3-202ENST00000460120 ZNF501Q96CX3 271 aaPredicted RBP16.3■□□□□ 0.2
HPS3-202ENST00000460120 C5orf34Q96MH7 638 aa16.3■□□□□ 0.2
HPS3-202ENST00000460120 RABL2AQ9UBK7 228 aaPredicted RBP16.3■□□□□ 0.2
HPS3-202ENST00000460120 SCP2D1Q9UJQ7 156 aa16.3■□□□□ 0.2
HPS3-202ENST00000460120 IGLV1-36A0A0B4J1U3 117 aa16.3■□□□□ 0.2
HPS3-202ENST00000460120 FADS1O60427 444 aa16.3■□□□□ 0.2
HPS3-202ENST00000460120 PSMA6P60900 246 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms