RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PRSS37A4D1T9 235 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 NKX2-6A6NCS4 301 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 NDUFS8O00217 210 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 SLC25A27O95847 323 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 TSPAN13O95857 204 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 KRT14P02533 472 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 S100A6P06703 90 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CALM1P0DP23 149 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CALM2P0DP24 149 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CALM3P0DP25 149 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 AK4P27144 223 aaPredicted RBP3.65□□□□□ -1.83
CCDC50-203ENST00000460064 SERPINB5P36952 375 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CCT6AP40227 531 aaKnown RBP3.65□□□□□ -1.83
CCDC50-203ENST00000460064 SPANXN2Q5MJ10 180 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CYB5R2Q6BCY4 276 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 ANKRD26P1Q6NSI1 321 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 Q6ZSR3 168 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 LINC00173Q6ZV60 143 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 H2AFVQ71UI9 128 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 FAM9CQ8IZT9 166 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 SLC7A5P1Q8MH63 180 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 TRIML2Q8N7C3 387 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 FBXL13Q8NEE6 735 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 SLC7A13Q8TCU3 470 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 SIKE1Q9BRV8 207 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 RACGAP1Q9H0H5 632 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 DNTTIP1Q9H147 329 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 OR51M1Q9H341 326 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 RPF2Q9H7B2 306 aaKnown RBP3.65□□□□□ -1.83
CCDC50-203ENST00000460064 TMEM185BQ9H7F4 350 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF226Q9NYT6 803 aa3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CENPJQ9HC77 1338 aaPredicted RBP3.65□□□□□ -1.83
CCDC50-203ENST00000460064 CDC42BPBQ9Y5S2 1711 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 TRBV6-6A0A0A6YYG2 114 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 A0A0B4J2A0 478 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 TRBV11-1A0A0K0K1C0 115 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 LOC100653049A0A140TA62 436 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 F6UB75 175 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 CDC7O00311 574 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 CDH16O75309 829 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 EEDO75530 441 aaKnown RBP3.64□□□□□ -1.83
CCDC50-203ENST00000460064 KRT34O76011 436 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 IGHV3-43DP0DP04 118 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 MDKP21741 143 aaPredicted RBP3.64□□□□□ -1.83
CCDC50-203ENST00000460064 RRM2P31350 389 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 FOXN2P32314 431 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 RFX3P48380 749 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 SSR4P51571 173 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 CCR6P51684 374 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 LIPEQ05469 1076 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 TWF1Q12792 350 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 CLINT1Q14677 625 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 TMEM183BQ1AE95 376 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 ALKBH6Q3KRA9 238 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 LY6G6FQ5SQ64 297 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 C9orf135Q5VTT2 229 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 TMEM179Q6ZVK1 233 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 LUZP2Q86TE4 346 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 TMEM183AQ8IXX5 376 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 MREGQ8N565 214 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 ARIH2OSQ8N7S6 290 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 OR4C5Q8NGB2 326 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 OR51G1Q8NGK1 321 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 MCUR1Q96AQ8 359 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 PIK3IP1Q96FE7 263 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 PANX1Q96RD7 426 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 P2RX4Q99571 388 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 PARVGQ9HBI0 331 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF160Q9HCG1 818 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 STOX2Q9P2F5 926 aaPredicted RBP3.64□□□□□ -1.83
CCDC50-203ENST00000460064 UXTQ9UBK9 157 aaPredicted RBP3.64□□□□□ -1.83
CCDC50-203ENST00000460064 SHPKQ9UHJ6 478 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 ING4Q9UNL4 249 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 GOLT1BQ9Y3E0 138 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 F11RQ9Y624 299 aaKnown RBP3.64□□□□□ -1.83
CCDC50-203ENST00000460064 NFASCO94856 1347 aa3.64□□□□□ -1.83
CCDC50-203ENST00000460064 CIB4A0PJX0 185 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 KMOO15229 486 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 MRPS12O15235 138 aaKnown RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 NVLO15381 856 aaKnown RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 SUPT3HO75486 399 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 CA11O75493 328 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 H6PDO95479 791 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 PCCAP05165 728 aaPredicted RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 UBTFL6P0CB48 400 aaPredicted RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 STAG3L3P0CL85 134 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 SMIM10L1P0DMW3 83 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF250P15622 560 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 MGMTP16455 207 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF3P17036 446 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 BMI1P35226 326 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 NUTF2P61970 127 aaKnown RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 RPS15P62841 145 aaKnown RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 PRPSAP1Q14558 356 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF658BQ4V348 819 aaPredicted RBP3.63□□□□□ -1.83
CCDC50-203ENST00000460064 VAX1Q5SQQ9 334 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 REEP3Q6NUK4 255 aa3.63□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF530Q6P9A1 599 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms