RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 BAG5Q9UL15 447 aa13.04□□□□□ -0.32
CROCCP4-201ENST00000457096 A4GNTQ9UNA3 340 aa13.04□□□□□ -0.32
CROCCP4-201ENST00000457096 IGLV3-9A0A075B6K5 115 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 LOC100509620A0A075B734 347 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 TRAV27A0A087WT01 109 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 C17orf100A8MU93 164 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 TSPAN19P0C672 248 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 IFI30P13284 250 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 ZNF250P15622 560 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 ITGA2P17301 1181 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 KDELR2P33947 212 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 RBM34P42696 430 aaKnown RBP13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 UCP2P55851 309 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 KLF3P57682 345 aaPredicted RBP13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 LMO4P61968 165 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 HSF2Q03933 536 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 TSTQ16762 297 aaKnown RBP13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 TBC1D28Q2M2D7 210 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 SPRNQ5BIV9 151 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 SLC25A47Q6Q0C1 308 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 OR1J1Q8NGS3 322 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 RASSF5Q8WWW0 418 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 RCN3Q96D15 328 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 SIKE1Q9BRV8 207 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 HIF1ANQ9NWT6 349 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 CMTM6Q9NX76 183 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 FBXL3Q9UKT7 428 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 ZNF346Q9UL40 294 aaKnown RBP13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 MED31Q9Y3C7 131 aa13.03□□□□□ -0.32
CROCCP4-201ENST00000457096 IQCMA0A1B0GVH7 501 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 FAM220BPB1ANY3 271 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 H7C1C5 153 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 SCG5P05408 212 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 TROVE2P10155 538 aaKnown RBP eCLIP13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 GAAP10253 952 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 APLNRP35414 380 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 THBS2P35442 1172 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 DAP3P51398 398 aaKnown RBP13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 DVL1P1P54792 670 aaPredicted RBP13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 LCN6P62502 163 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 PLP2Q04941 152 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 ALG10Q5BKT4 473 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 THEM4Q5T1C6 240 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 C10orf128Q5T292 105 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 OR51A7Q8NH64 312 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 ZNF519Q8TB69 540 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 SH3GL1Q99961 368 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 WNT5BQ9H1J7 359 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 CCNB1IP1Q9NPC3 277 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 MAN2C1Q9NTJ4 1040 aa13.02□□□□□ -0.33
CROCCP4-201ENST00000457096 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 B4DSR2 109 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 FFAR1O14842 300 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 SNAP29O95721 258 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 VIMP08670 466 aaKnown RBP13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 STOMP27105 288 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 LAP3P28838 519 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 ZNF133P52736 654 aaPredicted RBP13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 CTXN1P60606 82 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 MRPS34P82930 218 aaKnown RBP13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 PSG4Q00888 419 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 GUCY1A3Q02108 690 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 FHL1Q13642 323 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 ERICH5Q6P6B1 374 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 TMEM154Q6P9G4 183 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 TBPL2Q6SJ96 375 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 RFPL4BQ6ZWI9 263 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 USP51Q70EK9 711 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 GLCCI1Q86VQ1 547 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 NRMQ8IXM6 262 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 LRRC75AQ8NAA5 344 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 OR2T12Q8NG77 320 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 OR13C2Q8NGS9 318 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 IPCEF1Q8WWN9 437 aaPredicted RBP13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 LIPHQ8WWY8 451 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 C11orf40Q8WZ69 217 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 TMEM186Q96B77 213 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 BPIFA2Q96DR5 249 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 POM121L2Q96KW2 1035 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 PRRC1Q96M27 445 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 LRRC37BQ96QE4 947 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 TXNIPQ9H3M7 391 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 SIAEQ9HAT2 523 aa13.01□□□□□ -0.33
CROCCP4-201ENST00000457096 A0A1W2PPL8 197 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 ELOVL7A1L3X0 281 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 BBIP1A8MTZ0 92 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 TPD52L2O43399 206 aaKnown RBP13□□□□□ -0.33
CROCCP4-201ENST00000457096 SPRY3O43610 288 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 TCF21O43680 179 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 VENTXO95231 258 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 NGFP01138 241 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 AVPP01185 164 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 MSMBP08118 114 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 COQ5Q5HYK3 327 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 UGT2A3Q6UWM9 527 aa13□□□□□ -0.33
CROCCP4-201ENST00000457096 C1orf229Q6ZS94 237 aaPredicted RBP13□□□□□ -0.33
CROCCP4-201ENST00000457096 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13□□□□□ -0.33
CROCCP4-201ENST00000457096 SLC25A40Q8TBP6 338 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms