RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SDHAP31040 664 aa15.02■□□□□ -0
USP39-208ENST00000455732 PTDSS1P48651 473 aaKnown RBP15.02■□□□□ -0
USP39-208ENST00000455732 FMODQ06828 376 aa15.02■□□□□ -0
USP39-208ENST00000455732 PIGFQ07326 219 aa15.02■□□□□ -0
USP39-208ENST00000455732 FAM98BQ52LJ0 330 aaKnown RBP15.02■□□□□ -0
USP39-208ENST00000455732 MESTQ5EB52 335 aa15.02■□□□□ -0
USP39-208ENST00000455732 GPR139Q6DWJ6 353 aa15.02■□□□□ -0
USP39-208ENST00000455732 SMARCD3Q6STE5 483 aa15.02■□□□□ -0
USP39-208ENST00000455732 THSD4Q6ZMP0 1018 aa15.02■□□□□ -0
USP39-208ENST00000455732 DPY19L2P2Q6ZN68 376 aa15.02■□□□□ -0
USP39-208ENST00000455732 FOXL2NBQ6ZUU3 175 aa15.02■□□□□ -0
USP39-208ENST00000455732 FGFBP3Q8TAT2 258 aa15.02■□□□□ -0
USP39-208ENST00000455732 NABP1Q96AH0 204 aa15.02■□□□□ -0
USP39-208ENST00000455732 LRGUKQ96M69 825 aa15.02■□□□□ -0
USP39-208ENST00000455732 ZNF570Q96NI8 536 aa15.02■□□□□ -0
USP39-208ENST00000455732 SH3GL3Q99963 347 aa15.02■□□□□ -0
USP39-208ENST00000455732 BTBD10Q9BSF8 475 aa15.02■□□□□ -0
USP39-208ENST00000455732 ZNF442Q9H7R0 627 aa15.02■□□□□ -0
USP39-208ENST00000455732 SIAEQ9HAT2 523 aa15.02■□□□□ -0
USP39-208ENST00000455732 AQP12BA6NM10 295 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 H7C417 338 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 XKRYO14609 159 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 TXNDC12O95881 172 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 IGHV4-39P01824 125 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 SERPINA5P05154 406 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 ZNF35P13682 527 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 HOXB6P17509 224 aaKnown RBP15.01□□□□□ -0.01
USP39-208ENST00000455732 GSSP48637 474 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 HGFACQ04756 655 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 CHRNB3Q05901 458 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 BNIP1Q12981 228 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 SLC36A2Q495M3 483 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 C1orf94Q6P1W5 598 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 DNM1P46Q6ZS02 220 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 ADCK1Q86TW2 530 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 AQP12AQ8IXF9 295 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 LINC00471Q8N535 108 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 CLDN22Q8N7P3 220 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 OR4C15Q8NGM1 316 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 FANK1Q8TC84 345 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 MS4A3Q96HJ5 214 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 Q96M85 177 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 BARX1Q9HBU1 254 aaPredicted RBP15.01□□□□□ -0.01
USP39-208ENST00000455732 GDF2Q9UK05 429 aaPredicted RBP15.01□□□□□ -0.01
USP39-208ENST00000455732 YLPM1P49750 1951 aaKnown RBP15.01□□□□□ -0.01
USP39-208ENST00000455732 ABCA1O95477 2261 aa15.01□□□□□ -0.01
USP39-208ENST00000455732 SLC22A23A1A5C7 686 aa15□□□□□ -0.01
USP39-208ENST00000455732 PRSS37A4D1T9 235 aa15□□□□□ -0.01
USP39-208ENST00000455732 TNFRSF11BO00300 401 aa15□□□□□ -0.01
USP39-208ENST00000455732 PATE4P0C8F1 98 aa15□□□□□ -0.01
USP39-208ENST00000455732 RAP2AP10114 183 aa15□□□□□ -0.01
USP39-208ENST00000455732 TSPAN31Q12999 210 aa15□□□□□ -0.01
USP39-208ENST00000455732 TNK1Q13470 666 aa15□□□□□ -0.01
USP39-208ENST00000455732 KRR1Q13601 381 aaKnown RBP15□□□□□ -0.01
USP39-208ENST00000455732 EFNB3Q15768 340 aa15□□□□□ -0.01
USP39-208ENST00000455732 SWI5Q1ZZU3 235 aa15□□□□□ -0.01
USP39-208ENST00000455732 CLEC12BQ2HXU8 276 aa15□□□□□ -0.01
USP39-208ENST00000455732 TMEM53Q6P2H8 277 aa15□□□□□ -0.01
USP39-208ENST00000455732 PGBD2Q6P3X8 592 aa15□□□□□ -0.01
USP39-208ENST00000455732 CLEC9AQ6UXN8 241 aa15□□□□□ -0.01
USP39-208ENST00000455732 SLC16A14Q7RTX9 510 aa15□□□□□ -0.01
USP39-208ENST00000455732 ZNF584Q8IVC4 421 aa15□□□□□ -0.01
USP39-208ENST00000455732 NSMAFQ92636 917 aa15□□□□□ -0.01
USP39-208ENST00000455732 HTRA1Q92743 480 aa15□□□□□ -0.01
USP39-208ENST00000455732 CACNG6Q9BXT2 260 aa15□□□□□ -0.01
USP39-208ENST00000455732 C1orf198Q9H425 327 aa15□□□□□ -0.01
USP39-208ENST00000455732 RTTNQ86VV8 2226 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 TEX13CA0A0J9YWL9 993 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 FAM171A2A8MVW0 826 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 SMAD7O15105 426 aaKnown RBP14.99□□□□□ -0.01
USP39-208ENST00000455732 DNAJC8O75937 253 aaPredicted RBP14.99□□□□□ -0.01
USP39-208ENST00000455732 LY6G6DO95868 133 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 HEXAP06865 529 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 MMP7P09237 267 aaPredicted RBP14.99□□□□□ -0.01
USP39-208ENST00000455732 BMP4P12644 408 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 NR4A1P22736 598 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 CDAP32320 146 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 SERPINF1P36955 418 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 RPS6KA3P51812 740 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 GK3PQ14409 553 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 RAB39AQ14964 217 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 ADIPOQQ15848 244 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 MST1LQ2TV78 715 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 RFX4Q33E94 735 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 FAM27BQ5VT28 67 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 OR2T5Q6IEZ7 315 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 ZNF770Q6IQ21 691 aaPredicted RBP14.99□□□□□ -0.01
USP39-208ENST00000455732 ZNF620Q6ZNG0 422 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 Q71RC1 249 aaPredicted RBP14.99□□□□□ -0.01
USP39-208ENST00000455732 ADGRG5Q8IZF4 528 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 OR2T29Q8NH02 315 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 GNPDA2Q8TDQ7 276 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 RASD2Q96D21 266 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 OR52D1Q9H346 318 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 VSX1Q9NZR4 365 aaPredicted RBP14.99□□□□□ -0.01
USP39-208ENST00000455732 IL20RAQ9UHF4 553 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 HIVEP2P31629 2446 aa14.99□□□□□ -0.01
USP39-208ENST00000455732 DHRS12A0PJE2 317 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 B9A039 149 aa14.98□□□□□ -0.01
USP39-208ENST00000455732 H7C1C5 153 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms