RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 MVKQ03426 396 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 NKPD1Q17RQ9 610 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 SLC36A2Q495M3 483 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 SPATA46Q5T0L3 261 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 METTL21CQ5VZV1 264 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 TMEM53Q6P2H8 277 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 FOXL2NBQ6ZUU3 175 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 RFPL4BQ6ZWI9 263 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 TSEN54Q7Z6J9 526 aaKnown RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 IGFN1Q86VF2 1251 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 RBM15BQ8NDT2 890 aaKnown RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 OR8J3Q8NGG0 315 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 SLC26A7Q8TE54 656 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 C10orf82Q8WW14 230 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 IPCEF1Q8WWN9 437 aaPredicted RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
GPC1-206ENST00000455111 WNT5BQ9H1J7 359 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 POFUT1Q9H488 388 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 SAR1AQ9NR31 198 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 DCAF16Q9NXF7 216 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 HIF3AQ9Y2N7 669 aa13.64□□□□□ -0.23
GPC1-206ENST00000455111 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 CENPBD1B2RD01 187 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 J3KTA2 159 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 FFAR1O14842 300 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 RGS9O75916 674 aaPredicted RBP13.63□□□□□ -0.23
GPC1-206ENST00000455111 FARS2O95363 451 aaKnown RBP13.63□□□□□ -0.23
GPC1-206ENST00000455111 NGFP01138 241 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 IGHV1-46P01743 117 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 TFP02787 698 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 HIST1H2ABP04908 130 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 TAS2R41P59536 307 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 ERVK-25P63136 954 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 TBC1D28Q2M2D7 210 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 CYBRD1Q53TN4 286 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 THSD4Q6ZMP0 1018 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 HIST3H2AQ7L7L0 130 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 OR1J1Q8NGS3 322 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 NSMAFQ92636 917 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 HIST1H2ACQ93077 130 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 ZNF416Q9BWM5 594 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 TMPRSS13Q9BYE2 586 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 ZNF665Q9H7R5 613 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 SIAEQ9HAT2 523 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 NKIRAS2Q9NYR9 191 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 ZNF346Q9UL40 294 aaKnown RBP13.63□□□□□ -0.23
GPC1-206ENST00000455111 WIPI2Q9Y4P8 454 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 DYSFO75923 2080 aa13.63□□□□□ -0.23
GPC1-206ENST00000455111 LOC105371242A0A075B767 164 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 SLC22A23A1A5C7 686 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 NPIPB13A6NJU9 1138 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 NPIPB4C9JG80 1138 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 MRASO14807 208 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 PLPP2O43688 288 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 IGHMP01871 453 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 STOMP27105 288 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 KDELR2P33947 212 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 ENDOGQ14249 297 aaKnown RBP13.62□□□□□ -0.23
GPC1-206ENST00000455111 TSTQ16762 297 aaKnown RBP13.62□□□□□ -0.23
GPC1-206ENST00000455111 COQ5Q5HYK3 327 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 THEM4Q5T1C6 240 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 LIPNQ5VXI9 398 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 USP51Q70EK9 711 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 ICA1LQ8NDH6 482 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 SLC25A40Q8TBP6 338 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 RASSF5Q8WWW0 418 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 TXNIPQ9H3M7 391 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 CMTM6Q9NX76 183 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 RHCGQ9UBD6 479 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 KLHL21Q9UJP4 597 aa13.62□□□□□ -0.23
GPC1-206ENST00000455111 IGHV1-69-2A0A0G2JMI3 117 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 FAM220BPB1ANY3 271 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 MCIDASD6RGH6 385 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 IMPA2O14732 288 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 PRSS23O95084 383 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 IGHV2-5P01817 119 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 LAP3P28838 519 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 YAP1P46937 504 aaKnown RBP13.61□□□□□ -0.23
GPC1-206ENST00000455111 ZNF84P51523 738 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 TOP3AQ13472 1001 aaPredicted RBP13.61□□□□□ -0.23
GPC1-206ENST00000455111 CYLC2Q14093 348 aaPredicted RBP13.61□□□□□ -0.23
GPC1-206ENST00000455111 FAM27BQ5VT28 67 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 OTPQ5XKR4 325 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 UGT2A3Q6UWM9 527 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 VTCN1Q7Z7D3 282 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 DPPA2Q7Z7J5 298 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 MICU2Q8IYU8 434 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 C11orf40Q8WZ69 217 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 SIKE1Q9BRV8 207 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 OR2H1Q9GZK4 316 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 OR2J1Q9GZK6 312 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 POLR2J2Q9GZM3 115 aaKnown RBP13.61□□□□□ -0.23
GPC1-206ENST00000455111 POLR2J3Q9H1A7 115 aaKnown RBP13.61□□□□□ -0.23
GPC1-206ENST00000455111 C1orf198Q9H425 327 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 VIPAS39Q9H9C1 493 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 SMURF2Q9HAU4 748 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 METRNQ9UJH8 293 aa13.61□□□□□ -0.23
GPC1-206ENST00000455111 BAG5Q9UL15 447 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms