RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 GTF2IRD2Q86UP8 949 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF540Q8NDQ6 660 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 OR52I1Q8NGK6 324 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 MBD3L2Q8NHZ7 208 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 RNFT2Q96EX2 444 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 ADAD1Q96M93 576 aaKnown RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 ALKBH3Q96Q83 286 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 SNX18Q96RF0 628 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 SIGLEC11Q96RL6 698 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 TTYH2Q9BSA4 534 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 ALG12Q9BV10 488 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 WDR76Q9H967 626 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 ADGRL4Q9HBW9 690 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 RALYQ9UKM9 306 aaKnown RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 SH3D21A4FU49 640 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 A6NHS1 94 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 PRR32B1ATL7 298 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 J3QRE1 110 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 WDR1O75083 606 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 MRPL33O75394 65 aaKnown RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 TNFSF13O75888 250 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 SEC14L2O76054 403 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 GLCEO94923 617 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 TFAP2AP05549 437 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 GABRA1P14867 456 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 PAICSP22234 425 aaKnown RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 NAA10P41227 235 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 MTNR1AP48039 350 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 CSNK1A1P48729 337 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 GTF2A1P52655 376 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 ST3GAL4Q11206 333 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 IGFBP7Q16270 282 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF773Q6PK81 442 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 BTLAQ7Z6A9 289 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 MCEMP1Q8IX19 187 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 ST6GALNAC3Q8NDV1 305 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 PROKR2Q8NFJ6 384 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 OR51G2Q8NGK0 314 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 OR6K6Q8NGW6 343 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 OR6N1Q8NGY5 312 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 GMPPAQ96IJ6 420 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF649Q9BS31 505 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 VCX3AQ9NNX9 186 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 CCNB1IP1Q9NPC3 277 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 H2AFY2Q9P0M6 372 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-205ENST00000454569 COPS3Q9UNS2 423 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 RCE1Q9Y256 329 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 FKBP7Q9Y680 259 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 CHD6Q8TD26 2715 aa9.68□□□□□ -0.86
SCN9A-205ENST00000454569 TRIM64CA6NLI5 447 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 GPR171O14626 319 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 PRRG2O14669 202 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 SLC43A1O75387 559 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 WNT11O96014 354 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 MT-ND2P03891 347 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 GAAP10253 952 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CEACAM8P31997 349 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 MAP2K4P45985 399 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CENPAP49450 140 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF133P52736 654 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 PMPCAQ10713 525 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 SOWAHCQ53LP3 525 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 THEM4Q5T1C6 240 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 C9orf135Q5VTT2 229 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 FAM205BPQ63HN1 556 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 FAM214BQ7L5A3 538 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 SSX6Q7RTT6 188 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 TIGD4Q8IY51 512 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CNEP1R1Q8N9A8 125 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 OR2T4Q8NH00 348 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 STARD4Q96DR4 205 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 Q96MT0 163 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 RBP7Q96R05 134 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 TBX5Q99593 518 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 TTTY10Q9BZA0 68 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 SLCO5A1Q9H2Y9 848 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 TP63Q9H3D4 680 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CRLF2Q9HC73 371 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 GPR35Q9HC97 309 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 EMC7Q9NPA0 242 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 MRPS18AQ9NVS2 196 aaKnown RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CLEC2DQ9UHP7 191 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 EXOGQ9Y2C4 368 aaKnown RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 KLHDC2Q9Y2U9 406 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 RPL36Q9Y3U8 105 aaKnown RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 SNX5Q9Y5X3 404 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 A0A0G2JNJ9 132 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 FIGNL2A6NMB9 653 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 DHHO43323 396 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 KHDRBS3O75525 346 aaKnown RBP9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CGAP01215 116 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CDK1P06493 297 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 SBK2P0C263 348 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 FCGR2AP12318 317 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 ETV1P50549 477 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 CEACAM16Q2WEN9 425 aa9.67□□□□□ -0.86
SCN9A-205ENST00000454569 C10orf128Q5T292 105 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms