RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 NOX3Q9HBY0 568 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 BAIAP2Q9UQB8 552 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 ROS1P08922 2347 aa24.36■■□□□ 1.49
SMARCC1-203ENST00000454240 AKAP6Q13023 2319 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 SPG11Q96JI7 2443 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 SHISA9B4DS77 424 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 RAB1AP62820 205 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 SLC36A3Q495N2 470 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 ZNF362Q5T0B9 420 aaPredicted RBP24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 SLC35F1Q5T1Q4 408 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 FAHD1Q6P587 224 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 LEG1Q6P5S2 330 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 DPPA2Q7Z7J5 298 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 JAZF1Q86VZ6 243 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 KBTBD8Q8NFY9 601 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 OR2T33Q8NG76 320 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 OR4Q3Q8NH05 313 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 CENPNQ96H22 339 aaPredicted RBP24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 NMNAT3Q96T66 252 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 NUAK2Q9H093 628 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 NOTCH2Q04721 2471 aa24.35■■□□□ 1.49
SMARCC1-203ENST00000454240 CSMD1Q96PZ7 3565 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 G3V2T6 193 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 SLC16A7O60669 478 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 CECR9P0C854 216 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 PATE4P0C8F1 98 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 OSMP13725 252 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 DAPP51397 102 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 SPOCK1Q08629 439 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 SGCAQ16586 387 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 FAM27BQ5VT28 67 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 SLC16A14Q7RTX9 510 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 PIAS4Q8N2W9 510 aaPredicted RBP24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 NPEPL1Q8NDH3 523 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 OR52E2Q8NGJ4 325 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 DNAJC9Q8WXX5 260 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 AKAP1Q92667 903 aaKnown RBP eCLIP24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 DDOQ99489 341 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 SEC61A2Q9H9S3 476 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 POLQO75417 2590 aa24.34■■□□□ 1.49
SMARCC1-203ENST00000454240 KHDRBS3O75525 346 aaKnown RBP24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 RENP00797 406 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 CELA3BP08861 270 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 ZNF672Q499Z4 452 aaPredicted RBP24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 MYPOPQ86VE0 399 aaPredicted RBP24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 ZDHHC13Q8IUH4 622 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 SVOPLQ8N434 492 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 LRRC18Q8N456 261 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 SDR9C7Q8NEX9 313 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 TEX47Q8TBZ9 253 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 TSSK2Q96PF2 358 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 SEMA6AQ9H2E6 1030 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 UBTD1Q9HAC8 227 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 DSCAMO60469 2012 aa24.33■■□□□ 1.49
SMARCC1-203ENST00000454240 ANKRD17O75179 2603 aaKnown RBP24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 A0A1W2PPL8 197 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 OR6C68A6NDL8 312 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 H3BN98 237 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 DCTN6O00399 190 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 HS3ST1O14792 307 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 SCG5P05408 212 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 ZNF14P17017 642 aaPredicted RBP24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 ZNF23P17027 643 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 CRABP1P29762 137 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 GUCA1AP43080 201 aaPredicted RBP24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 GIPRP48546 466 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 PTDSS1P48651 473 aaKnown RBP24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 IDH3GP51553 393 aaPredicted RBP24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 SLC36A2Q495M3 483 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 PAMR1Q6UXH9 720 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 NEUROG1Q92886 237 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 PKP2Q99959 881 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 GABARAPL1Q9H0R8 117 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 POLE4Q9NR33 117 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 KIF17Q9P2E2 1029 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 ST6GALNAC2Q9UJ37 374 aa24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 COA3Q9Y2R0 106 aaPredicted RBP24.32■■□□□ 1.48
SMARCC1-203ENST00000454240 MMP7P09237 267 aaPredicted RBP24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 LAP3P28838 519 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 NAAAQ02083 359 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 NPRL3Q12980 569 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 DNM1P34Q6PK57 102 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 SLC22A25Q6T423 547 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 CDH24Q86UP0 819 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 OR6V1Q8N148 313 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 DEPDC4Q8N2C3 294 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 KCNN2Q9H2S1 579 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 PAPOLBQ9NRJ5 636 aaKnown RBP24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 EDARQ9UNE0 448 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 B9D1Q9UPM9 204 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 MOKQ9UQ07 419 aa24.31■■□□□ 1.48
SMARCC1-203ENST00000454240 IGLV1-36A0A0B4J1U3 117 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 RAB36O95755 333 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 CST2P09228 141 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 MSR1P21757 451 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 PGGHGQ32M88 737 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 TMEM53Q6P2H8 277 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 ZBTB46Q86UZ6 589 aa24.3■■□□□ 1.48
SMARCC1-203ENST00000454240 GLB1L2Q8IW92 636 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms