RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FGD3Q5JSP0 725 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 THEM4Q5T1C6 240 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 TMEM53Q6P2H8 277 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 RRM2BQ7LG56 351 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 SVOPLQ8N434 492 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 LRRC18Q8N456 261 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-207ENST00000453796 FAM168AQ92567 244 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 MRPL24Q96A35 216 aaKnown RBP12.55□□□□□ -0.4
HSPG2-207ENST00000453796 NSMCE2Q96MF7 247 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 GPX7Q96SL4 187 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-207ENST00000453796 GPA33Q99795 319 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 MRPL37Q9BZE1 423 aaKnown RBP12.55□□□□□ -0.4
HSPG2-207ENST00000453796 SLC7A8Q9UHI5 535 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 FBXO9Q9UK97 447 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-207ENST00000453796 ADAM18Q9Y3Q7 739 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 CMAHPQ9Y471 501 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 V9GYQ6 96 aa12.55□□□□□ -0.4
HSPG2-207ENST00000453796 SH3PXD2BA1X283 911 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 A6NIZ1 184 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 VSTM5A8MXK1 200 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 SNAP29O95721 258 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 CSF3P09919 207 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 T-ENOLP0DO92 83 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 SLC25A16P16260 332 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 ITGA2P17301 1181 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 EVX1P49640 407 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 MNAT1P51948 309 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 RAP1BP61224 184 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 RAP1AP62834 184 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 ERVK-25P63136 954 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 MESTQ5EB52 335 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 GKAP1Q5VSY0 366 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-207ENST00000453796 FAM27BQ5VT28 67 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 THSD4Q6ZMP0 1018 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 SLC30A7Q8NEW0 376 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 NSMAFQ92636 917 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 Q96M85 177 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 RBP7Q96R05 134 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 VRK1Q99986 396 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-207ENST00000453796 C1orf198Q9H425 327 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 RNF121Q9H920 327 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 IL1RAPQ9NPH3 570 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 NRIP3Q9NQ35 241 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 SPEF1Q9Y4P9 236 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 FKBP7Q9Y680 259 aa12.54□□□□□ -0.4
HSPG2-207ENST00000453796 SLC22A23A1A5C7 686 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 B2RBV5 119 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 VWC2LB2RUY7 222 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 NDUFB2O95178 105 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 GADD45GO95257 159 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 ZNF32P17041 273 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 MXRA7P84157 204 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 LOXL1Q08397 574 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-207ENST00000453796 LRP11Q86VZ4 500 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 ZCCHC24Q8N2G6 241 aaKnown RBP12.53□□□□□ -0.4
HSPG2-207ENST00000453796 CCDC197Q8NCU1 140 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 CPEB3Q8NE35 698 aaKnown RBP12.53□□□□□ -0.4
HSPG2-207ENST00000453796 OR52J3Q8NH60 311 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 NSL1Q96IY1 281 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 RSRC1Q96IZ7 334 aaKnown RBP12.53□□□□□ -0.4
HSPG2-207ENST00000453796 ACTR3BQ9P1U1 418 aa12.53□□□□□ -0.4
HSPG2-207ENST00000453796 TCRBV5S2A0A599 114 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 INAFM1C9JVW0 142 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 H7C1C5 153 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 AHCYL1O43865 530 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 PTHP01270 115 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 SCG5P05408 212 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 FABP3P05413 133 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 CST2P09228 141 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 CCL2P13500 99 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 ATP6V1B2P21281 511 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.41
HSPG2-207ENST00000453796 SDHAP31040 664 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 RPL4P36578 427 aaKnown RBP12.52□□□□□ -0.41
HSPG2-207ENST00000453796 PDLIM4P50479 330 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 SMIM11AP58511 58 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.41
HSPG2-207ENST00000453796 LCN6P62502 163 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 GALK2Q01415 458 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 SPIBQ01892 262 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 ENDOGQ14249 297 aaKnown RBP12.52□□□□□ -0.41
HSPG2-207ENST00000453796 SGCAQ16586 387 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 PABPC1L2AQ5JQF8 200 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 RINLQ6ZS11 566 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 ZER1Q7Z7L7 766 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 ZDHHC21Q8IVQ6 265 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 ARHGAP24Q8N264 748 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 ZNF570Q96NI8 536 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 RAB1BQ9H0U4 201 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 MYOZ1Q9NP98 299 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-207ENST00000453796 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.41
HSPG2-207ENST00000453796 GRHPRQ9UBQ7 328 aa12.52□□□□□ -0.41
HSPG2-207ENST00000453796 TEX13CA0A0J9YWL9 993 aa12.51□□□□□ -0.41
HSPG2-207ENST00000453796 IQCMA0A1B0GVH7 501 aa12.51□□□□□ -0.41
HSPG2-207ENST00000453796 PRSS37A4D1T9 235 aa12.51□□□□□ -0.41
HSPG2-207ENST00000453796 UNC119BA6NIH7 251 aa12.51□□□□□ -0.41
HSPG2-207ENST00000453796 NDUFS8O00217 210 aa12.51□□□□□ -0.41
HSPG2-207ENST00000453796 SYNGR3O43761 229 aa12.51□□□□□ -0.41
HSPG2-207ENST00000453796 CD5LO43866 347 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms