RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 RAB1AP62820 205 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TUBA1BP68363 451 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TUBA4AP68366 448 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 PIGFQ07326 219 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 GSG1Q2KHT4 349 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 SLC36A2Q495M3 483 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 NCMAPQ5T1S8 102 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 FAM27BQ5VT28 67 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TMEM236Q5W0B7 351 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TMEM53Q6P2H8 277 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TMEM108Q6UXF1 575 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TUBA1AQ71U36 451 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TMEM200AQ86VY9 491 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 GLB1L2Q8IW92 636 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 CBR4Q8N4T8 237 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 OR2T4Q8NH00 348 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 SLC38A2Q96QD8 506 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 PRRG3Q9BZD7 231 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 SLC25A19Q9HC21 320 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 CCNB1IP1Q9NPC3 277 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 RASSF1Q9NS23 344 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 USE1Q9NZ43 259 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 TMEFF2Q9UIK5 374 aaPredicted RBP12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 UGT2A1Q9Y4X1 527 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 FKBP7Q9Y680 259 aa12.76□□□□□ -0.37
NCKIPSD-207ENST00000453349 FLNCQ14315 2725 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 FAM221AA4D161 298 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 DEFB108AA8MXU0 73 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 EI24O14681 340 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 CTAG2O75638 210 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 RAB36O95755 333 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 HLA-HP01893 362 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 CD3EP07766 207 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 MSR1P21757 451 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 PTAFRP25105 342 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 NPRL3Q12980 569 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 CACNA1CQ13936 2221 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 C3orf36Q3SXR2 165 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 FREM1Q5H8C1 2179 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 FOXL2NBQ6ZUU3 175 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 ZBTB46Q86UZ6 589 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 DEPDC4Q8N2C3 294 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 FAM169BQ8N8A8 192 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 CYB561A3Q8NBI2 242 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 OTULINQ96BN8 352 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 TSSK2Q96PF2 358 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 FN3KQ9H479 309 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 RIBC2Q9H4K1 309 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 B3GNT2Q9NY97 397 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 TVP23BQ9NYZ1 205 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 FBXL3Q9UKT7 428 aa12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 HELZ2Q9BYK8 2649 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-207ENST00000453349 DPRXA6NFQ7 191 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 C12orf71A8MTZ7 269 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 PRR23D1E9PI22 279 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 SURF4O15260 269 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 HLA-DQA2P01906 255 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 HRGP04196 525 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 ALPLP05186 524 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 CST2P09228 141 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 PRR23D2P0DMB1 279 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 PCBD1P61457 104 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 GLO1Q04760 184 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 CRMP1Q14194 572 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 TRIP10Q15642 601 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 MDP1Q86V88 176 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 PROKR2Q8NFJ6 384 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 HTRA1Q92743 480 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 FOXN4Q96NZ1 517 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 DDOQ99489 341 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 KCNS3Q9BQ31 491 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 WACQ9BTA9 647 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 RACGAP1Q9H0H5 632 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 CLEC4MQ9H2X3 399 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 POLE4Q9NR33 117 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 NPAP1Q9NZP6 1156 aa12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 CRNNQ9UBG3 495 aaPredicted RBP12.74□□□□□ -0.37
NCKIPSD-207ENST00000453349 IGLV1-36A0A0B4J1U3 117 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 ZAR1LA6NP61 321 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 FAM171A2A8MVW0 826 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 DCTN6O00399 190 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 SIAH2O43255 324 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 MPZL1O95297 269 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 PTHP01270 115 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 IGKV3-15P01624 115 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 PATE4P0C8F1 98 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 CD40P25942 277 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 BLVRAP53004 296 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 SLC25A1P53007 311 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 LSM6P62312 80 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 HSF2Q03933 536 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 PLP2Q04941 152 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 BSPH1Q075Z2 132 aa12.73□□□□□ -0.37
NCKIPSD-207ENST00000453349 KCNMB1Q16558 191 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms