RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 C3orf33Q6P1S2 294 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 RANBP3LQ86VV4 465 aaPredicted RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 ATCAYQ86WG3 371 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 NKAIN4Q8IVV8 208 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 OR10D3Q8NH80 312 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 UBE2FQ969M7 185 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 KLHL15Q96M94 604 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 OR5B2Q96R09 309 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 PRSS27Q9BQR3 290 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 ZNF559Q9BR84 538 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 HHATLQ9HCP6 504 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 EXOSC4Q9NPD3 245 aaKnown RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 FKBP7Q9Y680 259 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 SPTAN1Q13813 2472 aaKnown RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 IGHV3-15A0A0B4J1V0 119 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 SH3D21A4FU49 640 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 TUBAL3A6NHL2 446 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 ZNF814B7Z6K7 855 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 LRRN3E7EW58 273 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 CXCR1P25024 350 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 PSMA1P25786 263 aaKnown RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 RPS19P39019 145 aaKnown RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 RBPJQ06330 500 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 ACSF3Q4G176 576 aaPredicted RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 CLVS2Q5SYC1 327 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 SHEQ5VZ18 495 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 KLHL17Q6TDP4 642 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 GDF7Q7Z4P5 450 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 GPAT4Q86UL3 456 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 LAX1Q8IWV1 398 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 OR9Q1Q8NGQ5 310 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 FNDC9Q8TBE3 224 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 GEMIN6Q8WXD5 167 aaKnown RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 KTI12Q96EK9 354 aaPredicted RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 TRIB1Q96RU8 372 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 TRIM2Q9C040 744 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 CLEC4MQ9H2X3 399 aaPredicted RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 TMEM27Q9HBJ8 222 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 MAN2C1Q9NTJ4 1040 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 NDUFAF4Q9P032 175 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 RPS6KB2Q9UBS0 482 aa8.8□□□□□ -1
CCDC171-203ENST00000449575 ERRFI1Q9UJM3 462 aaPredicted RBP8.8□□□□□ -1
CCDC171-203ENST00000449575 ZNF670-ZNF695F2Z2N8 137 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 CCL21O00585 134 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ADAMDEC1O15204 470 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 MPZL2O60487 215 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 AQP8O94778 261 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 HLA-DQB1P01920 261 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 RAF1P04049 648 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 IFNW1P05000 195 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 HOXD4P09016 255 aaPredicted RBP8.79□□□□□ -1
CCDC171-203ENST00000449575 TFPIP10646 304 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 PTBP1P26599 531 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC171-203ENST00000449575 EPHA2P29317 976 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 TAS2R41P59536 307 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 MYBPHQ13203 477 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 LAPTM4AQ15012 233 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 CDSNQ15517 529 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 DDI2Q5TDH0 399 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ULK3Q6PHR2 472 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ADGRE4PQ86SQ3 457 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 MEX3DQ86XN8 651 aaKnown RBP8.79□□□□□ -1
CCDC171-203ENST00000449575 CLDN22Q8N7P3 220 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 NAXEQ8NCW5 288 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ZNF431Q8TF32 576 aaPredicted RBP8.79□□□□□ -1
CCDC171-203ENST00000449575 ROBO4Q8WZ75 1007 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 AP3S1Q92572 193 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 OSTF1Q92882 214 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 DACT3Q96B18 629 aaPredicted RBP8.79□□□□□ -1
CCDC171-203ENST00000449575 SLC41A3Q96GZ6 507 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 DIRAS2Q96HU8 199 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 UCN2Q96RP3 112 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 TAPBPLQ9BX59 468 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 PPIL3Q9H2H8 161 aaKnown RBP8.79□□□□□ -1
CCDC171-203ENST00000449575 ENOPH1Q9UHY7 261 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ICE1Q9Y2F5 2266 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 A0A087WUJ7 227 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 FAM240BA0A1B0GVZ2 78 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ELOA3DA6NLF2 546 aaPredicted RBP8.79□□□□□ -1
CCDC171-203ENST00000449575 J3QKU1 62 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 PLA2G10O15496 165 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 FMO6PO60774 539 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 RAMP1O60894 148 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 NPIPB7O75200 414 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 GPX5O75715 221 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 IL1AP01583 271 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 SCG5P05408 212 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ZNF250P15622 560 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 DIO1P49895 249 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 GBX2P52951 348 aaPredicted RBP8.79□□□□□ -1
CCDC171-203ENST00000449575 PON3Q15166 354 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ELOA3BQ3SY89 546 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 HBMQ6B0K9 141 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 LINC00114Q6XXX2 140 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 LINC00518Q8N0U6 118 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 DTX3Q8N9I9 347 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 C9orf106Q8NAJ2 232 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 ELOA3Q8NG57 546 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 TMEM255BQ8WV15 326 aa8.79□□□□□ -1
CCDC171-203ENST00000449575 MARVELD1Q9BSK0 173 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms