RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	ATP1B3	P54709	279 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	CCL8	P80075	99 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	RPL18	Q07020	188 aa	Known RBP	7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	FAM189A2	Q15884	450 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF791	Q3KP31	576 aa	Predicted RBP	7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	DHRS4L2	Q6PKH6	230 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF517	Q6ZMY9	492 aa	Predicted RBP	7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	PXK	Q7Z7A4	578 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	CPO	Q8IVL8	374 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	ALG12	Q9BV10	488 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	RTL8A	Q9BWD3	113 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	ZC4H2	Q9NQZ6	224 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	PTTG3P	Q9NZH4	202 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	SLAMF8	Q9P0V8	285 aa		7.54	□□□□□ -1.2
HCG18-238	ENST00000449544	CD8B2	A6NJW9	211 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF593	O00488	134 aa	Predicted RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	CLIC3	O95833	236 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	GUSB	P08236	651 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	SMIM10L1	P0DMW3	83 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	SLC2A1	P11166	492 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	CD99	P14209	185 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	APOF	Q13790	326 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF239	Q16600	458 aa	Known RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	TSPO2	Q5TGU0	170 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	LPCAT4	Q643R3	524 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	NPSR1	Q6W5P4	371 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	KTI12	Q96EK9	354 aa	Predicted RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	SMIM10	Q96HG1	83 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ONECUT1	Q9UBC0	465 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	TBX19	O60806	448 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	APOL3	O95236	402 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ADRA2A	P08913	450 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	OR4A8	P0C604	315 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	PIP	P12273	146 aa	Predicted RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	S100A5	P33763	92 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	RBM34	P42696	430 aa	Known RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	CNN3	Q15417	329 aa	Known RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	PLPPR5	Q32ZL2	321 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	LRRC10	Q5BKY1	277 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ARIH2OS	Q8N7S6	290 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	NMNAT3	Q96T66	252 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	FEV	Q99581	238 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	TMEM38A	Q9H6F2	299 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	DCLRE1B	Q9H816	532 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	CYSLTR2	Q9NS75	346 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	IGKV3D-11	A0A0A0MRZ8	115 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	LOC100506127	A0A0U1RQW1	187 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	OR6C6	A6NF89	314 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	PATE4	P0C8F1	98 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	GCA	P28676	217 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	PTPN6	P29350	595 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ACTC1	P68032	377 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ACTA1	P68133	377 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	LTC4S	Q16873	150 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	TIMM50	Q3ZCQ8	353 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	PABPC1L2A	Q5JQF8	200 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	SFRP5	Q5T4F7	317 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	APOBEC3D	Q96AK3	386 aa	Predicted RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	SLCO4A1	Q96BD0	722 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	ASB9	Q96DX5	294 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	SLC22A4	Q9H015	551 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	WDR76	Q9H967	626 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	BCL2L10	Q9HD36	194 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	NTNG1	Q9Y2I2	539 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	KLK4	Q9Y5K2	254 aa		7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	RANBP2	P49792	3224 aa	Known RBP	7.53	□□□□□ -1.2
HCG18-238	ENST00000449544	LGALS8	O00214	317 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	T	O15178	435 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	SMAD9	O15198	467 aa	Known RBP	7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	SEMA7A	O75326	666 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	HTR3B	O95264	441 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	IGKV3-11	P04433	115 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	RAE1	P78406	368 aa	Known RBP	7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	TRAP1	Q12931	704 aa	Known RBP	7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	PRR18	Q8N4B5	295 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	CBR4	Q8N4T8	237 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	SPERT	Q8NA61	448 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	OR13C3	Q8NGS6	347 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	JMJD8	Q96S16	334 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	HDHD2	Q9H0R4	259 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	NIPAL2	Q9H841	368 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	CNOT11	Q9UKZ1	510 aa	Known RBP	7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	COMMD3-BMI1	R4GMX3	469 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	ADAMTS9	Q9P2N4	1935 aa		7.52	□□□□□ -1.2
HCG18-238	ENST00000449544	OR5H1	A6NKK0	313 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544		M0R135	149 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	TSPAN2	O60636	221 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	HPN	P05981	417 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF12	P17014	697 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	TIMP3	P35625	211 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ST3GAL4	Q11206	333 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	POU4F2	Q12837	409 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	MICB	Q29980	383 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	GPR157	Q5UAW9	335 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	PLXDC2	Q6UX71	529 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	THRSP	Q92748	146 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF799	Q96GE5	643 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	ZNF681	Q96N22	645 aa		7.52	□□□□□ -1.21
HCG18-238	ENST00000449544	POLR2J2	Q9GZM3	115 aa	Known RBP	7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms