RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GMNNO75496 209 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 RAB36O95755 333 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 SCG5P05408 212 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 ITGA2P17301 1181 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 EVX1P49640 407 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 ZNF84P51523 738 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 RAP1BP61224 184 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 RAP1AP62834 184 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 MS4A2Q01362 244 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 SNTB2Q13425 540 aaKnown RBP12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 TOP3AQ13472 1001 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 FAM205BPQ63HN1 556 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 KRT80Q6KB66 452 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 RRM2BQ7LG56 351 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 SLC16A14Q7RTX9 510 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 ZNF525Q8N782 197 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 CCDC197Q8NCU1 140 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 CPEB3Q8NE35 698 aaKnown RBP12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 OR52J3Q8NH60 311 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 FNDC8Q8TC99 324 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 C10orf105Q8TEF2 133 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 Q96M85 177 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 RHNO1Q9BSD3 238 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 ACTR3BQ9P1U1 418 aa12.12□□□□□ -0.47
RTFDC1-204ENST00000449062 TCRBV5S2A0A599 114 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 SLC22A23A1A5C7 686 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 VSTM5A8MXK1 200 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 VWC2LB2RUY7 222 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 AHCYL1O43865 530 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 TXNDC12O95881 172 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 PPOXP50336 477 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 NUDT6P53370 316 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 KRTAP21-3Q3LHN1 58 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 SLC36A2Q495M3 483 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 MESTQ5EB52 335 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 ARHGAP24Q8N264 748 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 ZCCHC24Q8N2G6 241 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 SVOPLQ8N434 492 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 LRRC18Q8N456 261 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 NSMAFQ92636 917 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 MRPL24Q96A35 216 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 MRPL37Q9BZE1 423 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 TAS2R1Q9NYW7 299 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 CMAHPQ9Y471 501 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 V9GYQ6 96 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 COL6A5A8TX70 2615 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 CR1P17927 2039 aa12.11□□□□□ -0.47
RTFDC1-204ENST00000449062 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 NDUFB2O95178 105 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 SNAP29O95721 258 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 CST2P09228 141 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 CCL2P13500 99 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 ATP6V1B2P21281 511 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 MAGEA2P43356 314 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 SMIM11AP58511 58 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 PSG4Q00888 419 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 LOXL1Q08397 574 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 CD47Q08722 323 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 ENDOGQ14249 297 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 TRIM25Q14258 630 aaKnown RBP12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 SGCAQ16586 387 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 PABPC1L2AQ5JQF8 200 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 FGD3Q5JSP0 725 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 TMEM53Q6P2H8 277 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 LRP11Q86VZ4 500 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 SLC30A7Q8NEW0 376 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 POM121L2Q96KW2 1035 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 RNF121Q9H920 327 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 FBXO9Q9UK97 447 aaPredicted RBP12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 SPEF1Q9Y4P9 236 aa12.1□□□□□ -0.47
RTFDC1-204ENST00000449062 PRSS37A4D1T9 235 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 UNC119BA6NIH7 251 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 H7C1C5 153 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 IMPA2O14732 288 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 GADD45GO95257 159 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 FABP3P05413 133 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 NR2C1P13056 603 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 APEHP13798 732 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 ZNF32P17041 273 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 CALB2P22676 271 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 APEX1P27695 318 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 LAP3P28838 519 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 PCSK6P29122 969 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 RPL4P36578 427 aaKnown RBP12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 GSSP48637 474 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 LCN6P62502 163 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 GPR139Q6DWJ6 353 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 LCN8Q6JVE9 175 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 C1orf94Q6P1W5 598 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 CLEC2AQ6UVW9 174 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 UGT2A3Q6UWM9 527 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 CYP2R1Q6VVX0 501 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 DPY19L2P2Q6ZN68 376 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 ZDHHC21Q8IVQ6 265 aa12.09□□□□□ -0.47
RTFDC1-204ENST00000449062 FAM168AQ92567 244 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms