RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 NANOGQ9H9S0 305 aa13.22□□□□□ -0.29
TRA2A-203ENST00000448549 A0A0G2JMP0 313 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 A0A0X1KG70 313 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 CLDN25C9JDP6 229 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 OR7A10O76100 309 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 SLC2A10O95528 541 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 IGHV2-5P01817 119 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 MT-ND1P03886 318 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 MT-ND5P03915 603 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 ADRA2CP18825 462 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 STOMP27105 288 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 COMPP49747 757 aaPredicted RBP13.21□□□□□ -0.29
TRA2A-203ENST00000448549 DAP3P51398 398 aaKnown RBP13.21□□□□□ -0.29
TRA2A-203ENST00000448549 ZNF81P51508 661 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 VMACQ2NL98 169 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 HFEQ30201 348 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 SPATA46Q5T0L3 261 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 C10orf128Q5T292 105 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 INTS11Q5TA45 600 aaKnown RBP13.21□□□□□ -0.29
TRA2A-203ENST00000448549 USP43Q70EL4 1123 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 ZNF771Q7L3S4 317 aaPredicted RBP13.21□□□□□ -0.29
TRA2A-203ENST00000448549 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 ZNF101Q8IZC7 436 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 C3orf56Q8N813 242 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 OR4M2Q8NGB6 313 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 MOSPD2Q8NHP6 518 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 FAM216AQ8WUB2 273 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 TMEM255BQ8WV15 326 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 KCNN2Q9H2S1 579 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 SAP30LQ9HAJ7 183 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 SIAEQ9HAT2 523 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 CCNB1IP1Q9NPC3 277 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 INIPQ9NRY2 104 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 C20orf141Q9NUB4 165 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 SH3GLB1Q9Y371 365 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 UGT2A1Q9Y4X1 527 aa13.21□□□□□ -0.29
TRA2A-203ENST00000448549 TMEM89A2RUT3 159 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 CENPBD1B2RD01 187 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 TRIM77I1YAP6 450 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 SPRY3O43610 288 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 MGRN1O60291 552 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 ZNF32P17041 273 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 TNFRSF1BP20333 461 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 MAKP20794 623 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 MPV17P39210 176 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 WNT5AP41221 380 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 GZMMP51124 257 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 ZNF133P52736 654 aaPredicted RBP13.2□□□□□ -0.3
TRA2A-203ENST00000448549 ARFIP2P53365 341 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 MRPS34P82930 218 aaKnown RBP13.2□□□□□ -0.3
TRA2A-203ENST00000448549 FMODQ06828 376 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 SGCAQ16586 387 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 TMEM255AQ5JRV8 349 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 THEM4Q5T1C6 240 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 ARMC4Q5T2S8 1044 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 CCDC80Q76M96 950 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 HDDC2Q7Z4H3 204 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 C1QL2Q7Z5L3 287 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 RASSF5Q8WWW0 418 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 CCL17Q92583 94 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 NSMAFQ92636 917 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 RAB1CQ92928 201 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 SGTBQ96EQ0 304 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 TIMD4Q96H15 378 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 POM121L2Q96KW2 1035 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
TRA2A-203ENST00000448549 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
TRA2A-203ENST00000448549 LOC100509620A0A075B734 347 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 IGKV1D-43A0A0B4J1Z2 117 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 C5orf49A4QMS7 147 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 SPRY1O43609 319 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 SHOX2O60902 331 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 IGHV1-46P01743 117 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 VIMP08670 466 aaKnown RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 GCH1P30793 250 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 RBM34P42696 430 aaKnown RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 MMP15P51511 669 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 TAS2R41P59536 307 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 PIN1Q13526 163 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 ZNF718Q3SXZ3 478 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 TTMPQ5BVD1 217 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 DCAF12L2Q5VW00 463 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 AKR7LQ8NHP1 331 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 TSPEARQ8WU66 669 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 TMEM239Q8WW34 195 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 IPCEF1Q8WWN9 437 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 HDAC2Q92769 488 aaKnown RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 NABP1Q96AH0 204 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 ELMOD3Q96FG2 381 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 MARS2Q96GW9 593 aaKnown RBP13.19□□□□□ -0.3
TRA2A-203ENST00000448549 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 SLC6A7Q99884 636 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 RIMS3Q9UJD0 308 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 TENM1Q9UKZ4 2725 aa13.19□□□□□ -0.3
TRA2A-203ENST00000448549 PLSCR5A0PG75 271 aa13.18□□□□□ -0.3
TRA2A-203ENST00000448549 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
TRA2A-203ENST00000448549 J3QLI3 93 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms