RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NRBF2Q96F24 287 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 NIPSNAP1Q9BPW8 284 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 TSSK6Q9BXA6 273 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 SYT4Q9H2B2 425 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 LIME1Q9H400 295 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 RERGLQ9H628 205 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 SIAEQ9HAT2 523 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 CCNB1IP1Q9NPC3 277 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 IL20Q9NYY1 176 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 CRNNQ9UBG3 495 aaPredicted RBP12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 FBXL3Q9UKT7 428 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 BAIAP2Q9UQB8 552 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 PLEKHA6Q9Y2H5 1048 aa12.22□□□□□ -0.45
GTF3C3-206ENST00000448539 H3BN98 237 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC16A7O60669 478 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 KHDRBS3O75525 346 aaKnown RBP12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 SOX14O95416 240 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 IGKV3-15P01624 115 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 CECR9P0C854 216 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 HIST1H1CP16403 213 aaKnown RBP12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 PRKACGP22612 351 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 CRABP1P29762 137 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 CDKN2AP42771 156 aaKnown RBP12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 GIPRP48546 466 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 SLC35F1Q5T1Q4 408 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 LEG1Q6P5S2 330 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 CD300LDQ6UXZ3 194 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 HIPK1Q86Z02 1210 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 HS3ST5Q8IZT8 346 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 LRRC18Q8N456 261 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 IL17RDQ8NFM7 739 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 OR2T33Q8NG76 320 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 OR4K13Q8NH42 304 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 TEX47Q8TBZ9 253 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 B3GNT2Q9NY97 397 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 VSX1Q9NZR4 365 aaPredicted RBP12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 ATP23Q9Y6H3 246 aa12.21□□□□□ -0.45
GTF3C3-206ENST00000448539 CELSR1Q9NYQ6 3014 aa12.21□□□□□ -0.46
GTF3C3-206ENST00000448539 ABCA4P78363 2273 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF503-AS2A6NEH8 195 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 SHISA9B4DS77 424 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 IGLV1-44P01699 117 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 PATE4P0C8F1 98 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF23P17027 643 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 MSR1P21757 451 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 POU1F1P28069 291 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 CENPAP49450 140 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 NAAAQ02083 359 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 PLP2Q04941 152 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 GABPB1Q06547 395 aaPredicted RBP12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 SPOCK1Q08629 439 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 ZFP1Q6P2D0 407 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 PTCHD4Q6ZW05 846 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 AMIGO2Q86SJ2 522 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 ZDHHC13Q8IUH4 622 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 ZNF611Q8N823 705 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 SDR9C7Q8NEX9 313 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 OR52E2Q8NGJ4 325 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 PYDC1Q8WXC3 89 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 DNAJC9Q8WXX5 260 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 HTRA1Q92743 480 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 NEUROG1Q92886 237 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 NMNAT3Q96T66 252 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 CCL19Q99731 98 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 PLA2G12AQ9BZM1 189 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 NTN4Q9HB63 628 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 ITGB1BP2Q9UKP3 347 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 UGT2A1Q9Y4X1 527 aa12.2□□□□□ -0.46
GTF3C3-206ENST00000448539 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 ATP6V1G2-DDX39BF2Z307 99 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 G3V2T6 193 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 BHLHE40O14503 412 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 ATE1O95260 518 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 PTHP01270 115 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 IFNGP01579 166 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 CELA3BP08861 270 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 CTLA4P16410 223 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 LAP3P28838 519 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 PCBD1P61457 104 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 HSF2Q03933 536 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 RAB39AQ14964 217 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 ETFDHQ16134 617 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 SLC36A3Q495N2 470 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 FAM27BQ5VT28 67 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 GLB1L2Q8IW92 636 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 LNX2Q8N448 690 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 OR8D4Q8NGM9 314 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 LILRB1Q8NHL6 650 aaPredicted RBP12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 LRTOMTQ8WZ04 291 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 PIGTQ969N2 578 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 NABP1Q96AH0 204 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 SNX18Q96RF0 628 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 TEX12Q9BXU0 123 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 NUAK2Q9H093 628 aa12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 SRA1Q9HD15 236 aaKnown RBP12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 RPRD1BQ9NQG5 326 aaKnown RBP12.19□□□□□ -0.46
GTF3C3-206ENST00000448539 FAIMQ9NVQ4 179 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms