RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SERPINF1P36955 418 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 BIKQ13323 160 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 UBE3DQ7Z6J8 389 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC6A7Q99884 636 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 MSRAQ9UJ68 235 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 WASF3Q9UPY6 502 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 ATG4BQ9Y4P1 393 aa8.56□□□□□ -1.04
SYNPO2-204ENST00000448416 CEP350Q5VT06 3117 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 POP4O95707 220 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 OR8G3PP0DMU2 310 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 COX5BP10606 129 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ELOCQ15369 112 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 C2orf76Q3KRA6 126 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 C22orf39Q6P5X5 142 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC25A42Q86VD7 318 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 NRROSQ86YC3 692 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC16A11Q8NCK7 471 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 OR9A2Q8NGT5 310 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ST7LQ8TDW4 575 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 BRI3BPQ8WY22 251 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ARSGQ96EG1 525 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 RNF126Q9BV68 326 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 RAB33BQ9H082 229 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 DOK5Q9P104 306 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 TMEM184BQ9Y519 407 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ANAPC1Q9H1A4 1944 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 AKR1C4P17516 323 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 RAB6AP20340 208 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 DIO1P49895 249 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 EIF5AP63241 154 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 SLC9A5Q14940 896 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ODF4Q2M2E3 257 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 EIPR1Q53HC9 387 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 C9orf131Q5VYM1 1079 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 AWAT2Q6E213 333 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 TCEAL6Q6IPX3 200 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 BTNL8Q6UX41 500 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 FAM220AQ7Z4H9 259 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 BIVMQ86UB2 503 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 C1QL4Q86Z23 238 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF417Q8TAU3 575 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ASB17Q8WXJ9 295 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 PMM1Q92871 262 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 CDS1Q92903 461 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 TMEM106AQ96A25 262 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 OR5B2Q96R09 309 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 LMF1Q96S06 567 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 NRTNQ99748 197 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 SOX7Q9BT81 388 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 GDF2Q9UK05 429 aaPredicted RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 IER3IP1Q9Y5U9 82 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 POMT1Q9Y6A1 747 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 CACNA1CQ13936 2221 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 CENPVL1A0A0U1RR11 272 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 MSGN1A6NI15 193 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 FAM157AC9JC47 383 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 STMND1H3BQB6 276 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 F10P00742 488 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF735P0CB33 412 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 TRA2BP62995 288 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 OR2A2Q6IF42 318 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 TTLL10Q6ZVT0 673 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ACBD4Q8NC06 268 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 OR1J1Q8NGS3 322 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 GRHL3Q8TE85 626 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNRF4Q8WWF5 429 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 FAM3DQ96BQ1 224 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ZMAT3Q9HA38 289 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 ADAM29Q9UKF5 820 aa8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 YBX2Q9Y2T7 364 aaKnown RBP8.55□□□□□ -1.04
SYNPO2-204ENST00000448416 TACSTD2P09758 323 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 OR8U9P0C7N5 309 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 EIF2B1Q14232 305 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CLLU1OSQ5K130 101 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CXCL17Q6UXB2 119 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 Q6ZRG5 221 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 TMPPEQ6ZT21 453 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF676Q8N7Q3 588 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 OR8U1Q8NH10 309 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CCDC74AQ96AQ1 378 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 KCNE5Q9UJ90 142 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CBY1Q9Y3M2 126 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 MTCL1Q9Y4B5 1905 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 A0A0A6YYD5 115 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 DUXAA6NLW8 204 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 FAM171A2A8MVW0 826 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CLDN4O14493 209 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 PLGP00747 810 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ITGA5P08648 1049 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CKBP12277 381 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 CYCSP99999 105 aaKnown RBP8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ERV3-1Q14264 604 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 GGTLC2Q14390 218 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 DHCR24Q15392 516 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 PDZD11Q5EBL8 140 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 GDPD4Q6W3E5 623 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 ZNF793Q6ZN11 406 aa8.54□□□□□ -1.04
SYNPO2-204ENST00000448416 KDF1Q8NAX2 398 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms