RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SYT4Q9H2B2 425 aa6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 VCXQ9H320 206 aa6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 VCX3BQ9H321 246 aa6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 SRA1Q9HD15 236 aaKnown RBP6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 GALNT8Q9NY28 637 aa6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 TAS2R16Q9NYV7 291 aa6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 NDRG4Q9ULP0 352 aaKnown RBP6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 B9D1Q9UPM9 204 aa6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 GPR52Q9Y2T5 361 aa6.63□□□□□ -1.35
AC004540.1-206ENST00000448056 DIDO1Q9BTC0 2240 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 NCOA6Q14686 2063 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 TENM4Q6N022 2769 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 SETXQ7Z333 2677 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 USP9XQ93008 2570 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 CIB4A0PJX0 185 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 FAM183AA6NL82 134 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ZNF99A8MXY4 864 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 DCTN6O00399 190 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 TLX2O43763 284 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 PRKYO43930 277 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 KHDRBS3O75525 346 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 LYZL6O75951 148 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 CTLA4P16410 223 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ZNF3P17036 446 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 PSMB1P20618 241 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 CRABP1P29762 137 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 CDAP32320 146 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 GGT2P36268 569 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ZNF84P51523 738 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 SLC25A1P53007 311 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 SH3BGRP55822 239 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 CDC42P60953 191 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ADARB1P78563 741 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 FMODQ06828 376 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 DBPQ10586 325 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 CRMP1Q14194 572 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 TSC22D1Q15714 1073 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 GABRA6Q16445 453 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 TTC23Q5W5X9 447 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 OR7E24Q6IFN5 339 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ANKRD16Q6P6B7 361 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ZNF627Q7L945 461 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 BHLHA15Q7RTS1 189 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ZBTB46Q86UZ6 589 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 CPOQ8IVL8 374 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 GLB1L2Q8IW92 636 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 DHRSXQ8N5I4 330 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 TCEANCQ8N8B7 351 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 ZNF555Q8NEP9 628 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 STEAP2Q8NFT2 490 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 OR1K1Q8NGR3 316 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 TRUB1Q8WWH5 349 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 BCL2L2Q92843 193 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 UBE2FQ969M7 185 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 PLEKHA8Q96JA3 519 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 PITX2Q99697 317 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 HCAR1Q9BXC0 346 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 PRRG3Q9BZD7 231 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 RASSF4Q9H2L5 321 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 RERGLQ9H628 205 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 RPRD1BQ9NQG5 326 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 COA3Q9Y2R0 106 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 UGT2A1Q9Y4X1 527 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 GMPPBQ9Y5P6 360 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 KLF2Q9Y5W3 355 aaPredicted RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 FKBP7Q9Y680 259 aa6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 INTS1Q8N201 2190 aaKnown RBP6.62□□□□□ -1.35
AC004540.1-206ENST00000448056 A0A096LPE4 126 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 IGLV1-36A0A0B4J1U3 117 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 A0A1W2PPZ6 126 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 FAM171A2A8MVW0 826 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 PRR23D1E9PI22 279 aaPredicted RBP6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 H0YAE9 185 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 M0R129 80 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 RAD51DO75771 328 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 MPZL1O95297 269 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 SCG5P05408 212 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 GYPBP06028 91 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 PRR23D2P0DMB1 279 aaPredicted RBP6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 CLUP10909 449 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 SPI1P17947 270 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 NPR2P20594 1047 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 PAICSP22234 425 aaKnown RBP6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 IL32P24001 234 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 LAP3P28838 519 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 CAPGP40121 348 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 VHLP40337 213 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 GUCA1AP43080 201 aaPredicted RBP6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 CENPAP49450 140 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 AQP4P55087 323 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 SNRPGP62308 76 aaKnown RBP6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 MRPS34P82930 218 aaKnown RBP6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 KEAP1Q14145 624 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 SGCAQ16586 387 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 NRN1LQ496H8 165 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 SLC25A30Q5SVS4 291 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 AADACL4Q5VUY2 407 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 PLBD1Q6P4A8 553 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 DNM1P34Q6PK57 102 aa6.61□□□□□ -1.35
AC004540.1-206ENST00000448056 ZNF813Q6ZN06 617 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms