RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 LAMP1P11279 417 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 PGAM1P18669 254 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CCKARP32238 428 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 BTDP43251 543 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 RANBP1P43487 201 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 KRTAP10-11P60412 298 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 PDIA2Q13087 525 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 SLAMF1Q13291 335 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 ITGB3BPQ13352 177 aaPredicted RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 ZNF718Q3SXZ3 478 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CT45A1Q5HYN5 189 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 ZNF506Q5JVG8 444 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 RNLSQ5VYX0 342 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 OLFML2AQ68BL7 652 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 PLEKHG7Q6ZR37 379 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 DNM1P46Q6ZS02 220 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 TMUB2Q71RG4 321 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 SSX6Q7RTT6 188 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 C1QL2Q7Z5L3 287 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 TMEM150AQ86TG1 271 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 SKA3Q8IX90 412 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CDRT4Q8N9R6 151 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 HSD17B11Q8NBQ5 300 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 DUSP18Q8NEJ0 188 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 OR6K2Q8NGY2 324 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 OR4Q3Q8NH05 313 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CT45A3Q8NHU0 189 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 OR8D1Q8WZ84 308 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 DNAJC1Q96KC8 554 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 ZNF597Q96LX8 424 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 FOXC2Q99958 501 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 TIMM29Q9BSF4 260 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 CHCHD5Q9BSY4 110 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 SELENOIQ9C0D9 397 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 SRRQ9GZT4 340 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 NSRP1Q9H0G5 558 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 ZBP1Q9H171 429 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 UPF3AQ9H1J1 476 aaKnown RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 SAV1Q9H4B6 383 aaPredicted RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 UBE2ZQ9H832 354 aaPredicted RBP3.04□□□□□ -1.92
PMS1-216ENST00000447734 JPT2Q9H910 190 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 SLC38A10Q9HBR0 1119 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 FGF22Q9HCT0 170 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 TREM2Q9NZC2 230 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 V9GY05 133 aa3.04□□□□□ -1.92
PMS1-216ENST00000447734 ADCY9O60503 1353 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 FABP12A6NFH5 140 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 A6NIZ1 184 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 F8VP50 259 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 F8VZ95 297 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SMKR1H3BMG3 65 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SMLR1H3BR10 107 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 BMPR1BO00238 502 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 TNFSF11O14788 317 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 B4GALT5O43286 388 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 EMC8O43402 210 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 COCHO43405 550 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 IDH3BO43837 385 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 ICOSLGO75144 302 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 MYO1DO94832 1006 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 GJB5O95377 273 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 BRI3O95415 125 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 TACSTD2P09758 323 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 RD3LP0DJH9 198 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 CALM1P0DP23 149 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 CALM2P0DP24 149 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 CALM3P0DP25 149 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 CXCR2P25025 360 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 HAAOP46952 286 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 DNASE1L1P49184 302 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 KLK7P49862 253 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SERPINB8P50452 374 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 RORCP51449 518 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SUB1P53999 127 aaKnown RBP eCLIP3.03□□□□□ -1.92
PMS1-216ENST00000447734 STX17P56962 302 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 HILS1P60008 231 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 RAP1BP61224 184 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SLC25A11Q02978 314 aaKnown RBP3.03□□□□□ -1.92
PMS1-216ENST00000447734 ZNF92Q03936 586 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 ACVR1Q04771 509 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 TWF1Q12792 350 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SLC39A6Q13433 755 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 CYLC2Q14093 348 aaPredicted RBP3.03□□□□□ -1.92
PMS1-216ENST00000447734 QRICH1Q2TAL8 776 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 ZBED5Q49AG3 693 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 TPTE2P1Q5T6R2 138 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 DUPD1Q68J44 220 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 C11orf71Q6IPW1 123 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 APOBEC3HQ6NTF7 200 aaKnown RBP3.03□□□□□ -1.92
PMS1-216ENST00000447734 CNIH2Q6PI25 160 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SETD3Q86TU7 594 aaPredicted RBP3.03□□□□□ -1.92
PMS1-216ENST00000447734 TMEM135Q86UB9 458 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 PPP1R27Q86WC6 154 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 CRLF3Q8IUI8 442 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 ABHD12Q8N2K0 398 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 MREGQ8N565 214 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 C4orf32Q8N8J7 132 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 Q8NBF4 154 aa3.03□□□□□ -1.92
PMS1-216ENST00000447734 SPATA3Q8NHX4 192 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms