RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 FAHD2AQ96GK7 314 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 LRFN5Q96NI6 719 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 TGIF2Q9GZN2 237 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 SLC17A5Q9NRA2 495 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 TCF20Q9UGU0 1960 aaKnown RBP17.44■□□□□ 0.38
HMGA1-205ENST00000447654 NUP210Q8TEM1 1887 aaPredicted RBP17.44■□□□□ 0.38
HMGA1-205ENST00000447654 CPED1A4D0V7 1026 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SLC16A8O95907 504 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 MBP02144 154 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CD3DP04234 171 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 RPN2P04844 631 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SNRNP70P08621 437 aaKnown RBP17.43■□□□□ 0.38
HMGA1-205ENST00000447654 MPZP25189 248 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CD80P33681 288 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SLC16A1P53985 500 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 RAP1AP62834 184 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 HEPN1Q6WQI6 88 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 ETV3LQ6ZN32 361 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 LYG2Q86SG7 212 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CD163Q86VB7 1156 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SFXN5Q8TD22 340 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 MITD1Q8WV92 249 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 OR8D1Q8WZ84 308 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 TM4SF18Q96CE8 201 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 AKR1E2Q96JD6 320 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SELENOIQ9C0D9 397 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 OR51V1Q9H2C8 321 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SLCO5A1Q9H2Y9 848 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 FN3KRPQ9HA64 309 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CEP290O15078 2479 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 GRXCR1A8MXD5 290 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CRHP06850 196 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 TEAD1P28347 426 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CLDN12P56749 244 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 GAMTQ14353 236 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SURF2Q15527 256 aaPredicted RBP17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CCSMST1Q4G0I0 132 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CLEC9AQ6UXN8 241 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 FAM24BQ8N5W8 94 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 LYPD6BQ8NI32 183 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 GPX8Q8TED1 209 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 R3HDM4Q96D70 268 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 SLC25A18Q9H1K4 315 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 UBQLN4Q9NRR5 601 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 CUTCQ9NTM9 273 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 IL36AQ9UHA7 158 aa17.43■□□□□ 0.38
HMGA1-205ENST00000447654 PRRT4C9JH25 899 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 SPINT1O43278 529 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 IL9P15248 144 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 FUT5Q11128 374 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 GGTLC2Q14390 218 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 OR7A5Q15622 319 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 CDPF1Q6NVV7 123 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 STAC2Q6ZMT1 411 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 ZNF227Q86WZ6 799 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 NRROSQ86YC3 692 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 OR10D4PQ8NGN7 298 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 ASB17Q8WXJ9 295 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 OTUB2Q96DC9 234 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 YPEL4Q96NS1 127 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 PHB2Q99623 299 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 NMES1Q9C002 83 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 NRSN2Q9GZP1 204 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 SIDT1Q9NXL6 827 aaKnown RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 WASF3Q9UPY6 502 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 TSPAN11A1L157 253 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 H7C1Q1 480 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 RAB3DO95716 219 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 WNT11O96014 354 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 PLGP00747 810 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 HLA-AP01891 365 aaKnown RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 ZBTB25P24278 435 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 SULT1A1P50225 295 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 SULT1A2P50226 295 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 ZNF574Q6ZN55 896 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 PARS2Q7L3T8 475 aaKnown RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 DCXRQ7Z4W1 244 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 SLC25A42Q86VD7 318 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 SEC22AQ96IW7 307 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 SMAD5Q99717 465 aaKnown RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 NDUFAF3Q9BU61 184 aa17.42■□□□□ 0.38
HMGA1-205ENST00000447654 MRPS23Q9Y3D9 190 aaKnown RBP17.42■□□□□ 0.38
HMGA1-205ENST00000447654 TSPAN6O43657 245 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 NPPBP16860 134 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 NME2P22392 152 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 CX3CR1P49238 355 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 FXYD6P3P58550 94 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 AKIRIN2Q53H80 203 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 STPG1Q5TH74 334 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 NXPE4Q6UWF7 544 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 TMED4Q7Z7H5 227 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 TMEM255BQ8WV15 326 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 MAFIPQ8WZ33 124 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 ISOC2Q96AB3 205 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 MOAP1Q96BY2 351 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 GALNT14Q96FL9 552 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 MCHR1Q99705 422 aa17.41■□□□□ 0.38
HMGA1-205ENST00000447654 SPOCK3Q9BQ16 436 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms