RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-215	ENST00000447463	WIPI2	Q9Y4P8	454 aa		11.24	□□□□□ -0.61
HDAC7-215	ENST00000447463	PKD1L1	Q8TDX9	2849 aa		11.24	□□□□□ -0.61
HDAC7-215	ENST00000447463	MEGF8	Q7Z7M0	2845 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	TRIM77	I1YAP6	450 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	TRMU	O75648	421 aa	Known RBP	11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	AVP	P01185	164 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	IGHV2-5	P01817	119 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	MT-ND1	P03886	318 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	ACADS	P16219	412 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	CCNO	P22674	350 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	STOM	P27105	288 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	ZNF81	P51508	661 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	ZNF133	P52736	654 aa	Predicted RBP	11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	ARFIP2	P53365	341 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	UGT2B15	P54855	530 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	GLO1	Q04760	184 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	TST	Q16762	297 aa	Known RBP	11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	HFE	Q30201	348 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	PABPC1L2A	Q5JQF8	200 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	FAM209A	Q5JX71	171 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	C10orf128	Q5T292	105 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	C1QL2	Q7Z5L3	287 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	C3orf56	Q8N813	242 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	CPEB3	Q8NE35	698 aa	Known RBP	11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	OR10A6	Q8NH74	314 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	DYDC1	Q8WWB3	177 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	STON2	Q8WXE9	905 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	GTF3A	Q92664	365 aa	Known RBP	11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	RAB1C	Q92928	201 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	ZMYND19	Q96E35	227 aa	Predicted RBP	11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	TIMD4	Q96H15	378 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	SUCNR1	Q9BXA5	334 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	TMPRSS13	Q9BYE2	586 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	NANOG	Q9H9S0	305 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	SIAE	Q9HAT2	523 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	CCNB1IP1	Q9NPC3	277 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	STX18	Q9P2W9	335 aa	Known RBP	11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	CACNG2	Q9Y698	323 aa		11.23	□□□□□ -0.61
HDAC7-215	ENST00000447463	TMEM89	A2RUT3	159 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463		J3QLI3	93 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	SPRY1	O43609	319 aa	Predicted RBP	11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	OR7A10	O76100	309 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	SLC2A10	O95528	541 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	IGF2	P01344	180 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	FUT1	P19526	365 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	GATA3	P23771	443 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	GCH1	P30793	250 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	AQP2	P41181	271 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	RBM34	P42696	430 aa	Known RBP	11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	MRPS34	P82930	218 aa	Known RBP	11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	NFYC	Q13952	458 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	VMAC	Q2NL98	169 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	ZNF718	Q3SXZ3	478 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	DCAF12L2	Q5VW00	463 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	UNQ6126/PRO20091	Q6UXV3	157 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	CCDC80	Q76M96	950 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	ZNF101	Q8IZC7	436 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	PFN4	Q8NHR9	129 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	TSPEAR	Q8WU66	669 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	ELMOD3	Q96FG2	381 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	RBM4	Q9BWF3	364 aa	Known RBP	11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	SMURF2	Q9HAU4	748 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	INIP	Q9NRY2	104 aa		11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	EIF3K	Q9UBQ5	218 aa	Known RBP	11.22	□□□□□ -0.61
HDAC7-215	ENST00000447463	PLSCR5	A0PG75	271 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	C5orf49	A4QMS7	147 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	NPIPB13	A6NJU9	1138 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	NPIPB4	C9JG80	1138 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	TSPAN19	P0C672	248 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	NR2C1	P13056	603 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	ZNF32	P17041	273 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	ADRA2C	P18825	462 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	CDA	P32320	146 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	WNT5A	P41221	380 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	LIMS1	P48059	325 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	CRYBA2	P53672	197 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	TAS2R41	P59536	307 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	CD47	Q08722	323 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	SPATA46	Q5T0L3	261 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	THEM4	Q5T1C6	240 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	ARMC4	Q5T2S8	1044 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	NKAIN4	Q8IVV8	208 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	C1orf174	Q8IYL3	243 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	NANP	Q8TBE9	248 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	TMEM255B	Q8WV15	326 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	TMEM239	Q8WW34	195 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	CCL17	Q92583	94 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	NABP1	Q96AH0	204 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	SGTB	Q96EQ0	304 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	MARS2	Q96GW9	593 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	POM121L2	Q96KW2	1035 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	ATP6V1G3	Q96LB4	118 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	SLC6A7	Q99884	636 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	GAL3ST1	Q99999	423 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	POLR2J2	Q9GZM3	115 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	POLR2J3	Q9H1A7	115 aa	Known RBP	11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	SH3GLB1	Q9Y371	365 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	UGT2A1	Q9Y4X1	527 aa		11.21	□□□□□ -0.61
HDAC7-215	ENST00000447463	ARHGAP32	A7KAX9	2087 aa		11.21	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms