RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 OPN1SWP03999 348 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 GDI2P50395 445 aaKnown RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 ZNF133P52736 654 aaPredicted RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 UCP2P55851 309 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 MYBPC1Q00872 1141 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 RIN1Q13671 783 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 HSP90B2PQ58FF3 399 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 SHQ1Q6PI26 577 aaKnown RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 SYT9Q86SS6 491 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 GPR32P1Q8NGA4 272 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 OR4K5Q8NGD3 323 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 RAB1CQ92928 201 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 MCHR2Q969V1 340 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 ELMOD3Q96FG2 381 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 COG8Q96MW5 612 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 HOPXQ9BPY8 73 aaPredicted RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 ZNF426Q9BUY5 554 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 MRPL37Q9BZE1 423 aaKnown RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 KRCC1Q9NPI7 259 aaPredicted RBP6.69□□□□□ -1.34
CD44-211ENST00000442151 TAAR3PQ9P1P4 343 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 JMJD1CQ15652 2540 aa6.69□□□□□ -1.34
CD44-211ENST00000442151 NSD1Q96L73 2696 aaPredicted RBP6.68□□□□□ -1.34
CD44-211ENST00000442151 PLSCR5A0PG75 271 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 ELOVL7A1L3X0 281 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 C17orf100A8MU93 164 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 FAM220BPB1ANY3 271 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 GSTA4O15217 222 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 PPIHO43447 177 aaKnown RBP6.68□□□□□ -1.34
CD44-211ENST00000442151 CCDC22O60826 627 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 TRMUO75648 421 aaKnown RBP6.68□□□□□ -1.34
CD44-211ENST00000442151 PGA4P0DJD7 388 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 PGA3P0DJD8 388 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 SAGP10523 405 aaPredicted RBP6.68□□□□□ -1.34
CD44-211ENST00000442151 ZNF250P15622 560 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 IGFBP5P24593 272 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 KDELR2P33947 212 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 SLC9A3P48764 834 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 UGT2B15P54855 530 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 SELENOWP63302 87 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 MRPS34P82930 218 aaKnown RBP6.68□□□□□ -1.34
CD44-211ENST00000442151 KLF10Q13118 480 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 HIST3H3Q16695 136 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 HFEQ30201 348 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 C10orf128Q5T292 105 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 ACSM5Q6NUN0 579 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 LRFN4Q6PJG9 635 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 DEF8Q6ZN54 512 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 CALHM3Q86XJ0 350 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 NOXO1Q8NFA2 376 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 OR51F2Q8NH61 342 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 ZNF418Q8TF45 676 aaPredicted RBP6.68□□□□□ -1.34
CD44-211ENST00000442151 ZFAND2BQ8WV99 257 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 IPCEF1Q8WWN9 437 aaPredicted RBP6.68□□□□□ -1.34
CD44-211ENST00000442151 TAMM41Q96BW9 452 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 ZNF75AQ96N20 296 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 SNX18Q96RF0 628 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 SYT3Q9BQG1 590 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 FNDC11Q9BVV2 318 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 TMEM120AQ9BXJ8 343 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 TXNIPQ9H3M7 391 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 TMEM5Q9Y2B1 443 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 TIMM10BQ9Y5J6 103 aa6.68□□□□□ -1.34
CD44-211ENST00000442151 C12orf71A8MTZ7 269 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 J3QLI3 93 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 KPNA4O00629 521 aaPredicted RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 LILRA1O75019 489 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 SEC14L2O76054 403 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 TNFSF4P23510 183 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 GATA3P23771 443 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 CPT2P23786 658 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 RPL27P61353 136 aaKnown RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 RPL18Q07020 188 aaKnown RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 CD47Q08722 323 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 TRAM2Q15035 370 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 SGCAQ16586 387 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 ALG10Q5BKT4 473 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 PHC2Q8IXK0 858 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 C10orf111Q8N326 155 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 OR2T12Q8NG77 320 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 RP9Q8TA86 221 aaKnown RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 C10orf82Q8WW14 230 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 ASB10Q8WXI3 467 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 THOC1Q96FV9 657 aaKnown RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 MRPL13Q9BYD1 178 aaKnown RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 TPK1Q9H3S4 243 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 SEC61A2Q9H9S3 476 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 EFCAB1Q9HAE3 211 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 ZDHHC8Q9ULC8 765 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 NDRG4Q9ULP0 352 aaKnown RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 FAM32AQ9Y421 112 aaKnown RBP6.67□□□□□ -1.34
CD44-211ENST00000442151 CAPN7Q9Y6W3 813 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 TLN2Q9Y4G6 2542 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 ALPK2Q86TB3 2170 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 RTTNQ86VV8 2226 aa6.67□□□□□ -1.34
CD44-211ENST00000442151 IGLV3-9A0A075B6K5 115 aa6.66□□□□□ -1.34
CD44-211ENST00000442151 LRP5LA4QPB2 252 aa6.66□□□□□ -1.34
CD44-211ENST00000442151 CLDN25C9JDP6 229 aa6.66□□□□□ -1.34
CD44-211ENST00000442151 LRRN3E7EW58 273 aa6.66□□□□□ -1.34
CD44-211ENST00000442151 IFNL4K9M1U5 179 aa6.66□□□□□ -1.34
CD44-211ENST00000442151 XKRYO14609 159 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms