RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TMEM244Q5VVB8 128 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 XKRXQ6PP77 449 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ASB18Q6ZVZ8 466 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 CCDC190Q86UF4 302 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 MCEMP1Q8IX19 187 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 OR8H2Q8N162 312 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 SLC26A10Q8NG04 563 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 ZNF671Q8TAW3 534 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 PSMF1Q92530 271 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 COX4I2Q96KJ9 171 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 MOB1AQ9H8S9 216 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 EMC3Q9P0I2 261 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 COMMD3Q9UBI1 195 aa5.39□□□□□ -1.55
VPS50-205ENST00000441602 MRM2Q9UI43 246 aaKnown RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 CDV3Q9UKY7 258 aaKnown RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 MRPS18BQ9Y676 258 aaKnown RBP5.39□□□□□ -1.55
VPS50-205ENST00000441602 EXPH5Q8NEV8 1989 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 OR6C65A6NJZ3 312 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 LRRTM2O43300 516 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 UPK1BO75841 260 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ACHEP22303 614 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SOX8P57073 446 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 CAMK2DQ13557 499 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ZNF468Q5VIY5 522 aaPredicted RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 CARD17Q5XLA6 110 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TRIQKQ629K1 86 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TMEM91Q6ZNR0 172 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TMPRSS7Q7RTY8 843 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 DTX1Q86Y01 620 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 GPR137CQ8N3F9 429 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 FAM83FQ8NEG4 500 aaPredicted RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 OR9K2Q8NGE7 335 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 OR2G2Q8NGZ5 317 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TRMT61AQ96FX7 289 aaKnown RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 TXNDC15Q96J42 360 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 C4orf45Q96LM5 186 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ABHD6Q9BV23 337 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PRRG4Q9BZD6 226 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SP140LQ9H930 580 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PROK2Q9HC23 129 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 CENPMQ9NSP4 180 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TBCCD1Q9NVR7 557 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SLCO1C1Q9NYB5 712 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 GLTPQ9NZD2 209 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 MCTS1Q9ULC4 181 aaKnown RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 UGT2A1Q9Y4X1 527 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SIRT4Q9Y6E7 314 aaPredicted RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 RANBP2P49792 3224 aaKnown RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 DCTN6O00399 190 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 CTDSP2O14595 271 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 WDPCPO95876 746 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SP1P08047 785 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 HLA-DOBP13765 273 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TGM1P22735 817 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 HSD11B1P28845 292 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SHC1P29353 583 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PTGS2P35354 604 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 CAPZA1P52907 286 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PYDC2Q56P42 97 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 WIPI1Q5MNZ9 446 aaPredicted RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 ZNF684Q5T5D7 378 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 BCL2L15Q5TBC7 163 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SLC25A47Q6Q0C1 308 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 UNQ9370/PRO34162Q6UXP9 181 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 RPTNQ6XPR3 784 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 AAED1Q7RTV5 226 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 LUZP2Q86TE4 346 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PARP16Q8N5Y8 322 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SETD6Q8TBK2 473 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SMAP2Q8WU79 429 aaPredicted RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 C15orf40Q8WUR7 153 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 C11orf40Q8WZ69 217 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PGLYRP3Q96LB9 341 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 EMC6Q9BV81 110 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ULBP2Q9BZM5 246 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ABCB9Q9NP78 766 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PARPBPQ9NWS1 579 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 HRH3Q9Y5N1 445 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 R4GMQ9 66 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 A0A0J9YW62 118 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 MEGF11A6BM72 1044 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 LRRC3CA6NJW4 275 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ANXA2P2A6NMY6 339 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TNFSF11O14788 317 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 TBX1O43435 398 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 CXCL13O43927 109 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PFDN1O60925 122 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 ANXA2P07355 339 aaKnown RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 UBCP0CG48 685 aaKnown RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 PGA4P0DJD7 388 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 PGA3P0DJD8 388 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 DCTDP32321 178 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 EIF1AXP47813 144 aaKnown RBP5.38□□□□□ -1.55
VPS50-205ENST00000441602 PITPNAQ00169 270 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 SCN1BQ07699 218 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 BCL2A1Q16548 175 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 KCNMB1Q16558 191 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 LYPD4Q6UWN0 246 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 DCXRQ7Z4W1 244 aa5.38□□□□□ -1.55
VPS50-205ENST00000441602 UBQLNLQ8IYU4 475 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms