RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM200CA6NKL6 621 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 OR2AT4A6NND4 320 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 COLCA2A8K830 154 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 FADS1O60427 444 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 F12P00748 615 aaPredicted RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 S100PP25815 95 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 CD34P28906 385 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 SRSF3P84103 164 aaKnown RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 C5orf46Q6UWT4 87 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 MISPQ8IVT2 679 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 OR52E1Q8NGJ3 308 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 OR8S1Q8NH09 359 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 STOML3Q8TAV4 291 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 ZNRF4Q8WWF5 429 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 DVL3Q92997 716 aaPredicted RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 INTS12Q96CB8 462 aaKnown RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 RBM18Q96H35 190 aaKnown RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 ZNF559Q9BR84 538 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 APOOQ9BUR5 198 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 POTEKPQ9BYX7 375 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 TPSD1Q9BZJ3 242 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 SEBOXQ9HB31 216 aaPredicted RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 PHPT1Q9NRX4 125 aaPredicted RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 WSB2Q9NYS7 404 aaPredicted RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 APOBEC3BQ9UH17 382 aaKnown RBP10.79□□□□□ -0.68
LTBR-203ENST00000441074 FBXL21Q9UKT6 434 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 CYP8B1Q9UNU6 501 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 IER3IP1Q9Y5U9 82 aa10.79□□□□□ -0.68
LTBR-203ENST00000441074 UBE2CO00762 179 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 WNT11O96014 354 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 ACTBP60709 375 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 ACTG1P63261 375 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 PEA15Q15121 130 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 PLEKHN1Q494U1 663 aaPredicted RBP10.78□□□□□ -0.68
LTBR-203ENST00000441074 ZNF425Q6IV72 752 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 NDUFAF7Q7L592 441 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 TMED4Q7Z7H5 227 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 OR4K14Q8NGD5 310 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 OR5AK2Q8NH90 309 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 GPX8Q8TED1 209 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 PPP1R1CQ8WVI7 109 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 BMFQ96LC9 184 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 BCL2L14Q9BZR8 327 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 TREM1Q9NP99 234 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 MMP26Q9NRE1 261 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 UQCC1Q9NVA1 299 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 DTX4Q9Y2E6 619 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 MEIS3P1A6NDR6 274 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 LRRC72A6NJI9 287 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 F8VVB4 439 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 F8VWA3 439 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 SRPX2O60687 465 aaPredicted RBP10.78□□□□□ -0.68
LTBR-203ENST00000441074 NDUFB2O95178 105 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 RAB3DO95716 219 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 TACSTD2P09758 323 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 HLA-GP17693 338 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 SOX2P48431 317 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 EFNB2P52799 333 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 ATP1B3P54709 279 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 TAS2R19P59542 299 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 DHRS2Q13268 280 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 ALKBH1Q13686 389 aaKnown RBP10.78□□□□□ -0.68
LTBR-203ENST00000441074 LRRC37A5PQ49AS3 106 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 RBMS3Q6XE24 437 aaKnown RBP10.78□□□□□ -0.68
LTBR-203ENST00000441074 IL34Q6ZMJ4 242 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 TMPRSS9Q7Z410 1059 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 TMEM229BQ8NBD8 167 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 INO80EQ8NBZ0 244 aaPredicted RBP10.78□□□□□ -0.68
LTBR-203ENST00000441074 OR5AP2Q8NGF4 316 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 OR4A4PQ8NGN8 299 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 OR1J2Q8NGS2 313 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 PAQR8Q8TEZ7 354 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 RNF141Q8WVD5 230 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 PMM1Q92871 262 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 TCEAL7Q9BRU2 100 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 EGLN1Q9GZT9 426 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 SLC2A4RGQ9NR83 387 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 KCNE5Q9UJ90 142 aa10.78□□□□□ -0.68
LTBR-203ENST00000441074 CDV3Q9UKY7 258 aaKnown RBP10.78□□□□□ -0.68
LTBR-203ENST00000441074 GOLGA4Q13439 2230 aaKnown RBP10.78□□□□□ -0.68
LTBR-203ENST00000441074 A0A087WV48 116 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 TRBV5-7A0A0A0MS05 114 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 A0A0B4J2E0 115 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 A0A1B0GX12 115 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 PRR32B1ATL7 298 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 PSMD9O00233 223 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 MAS1P04201 325 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 S100A6P06703 90 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 PTAFRP25105 342 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 PAX6P26367 422 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 RBM34P42696 430 aaKnown RBP10.77□□□□□ -0.69
LTBR-203ENST00000441074 BTN3A2P78410 334 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 SMCO1Q147U7 214 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 ATXN7L3Q14CW9 347 aaPredicted RBP10.77□□□□□ -0.69
LTBR-203ENST00000441074 ATPAF1Q5TC12 328 aaPredicted RBP10.77□□□□□ -0.69
LTBR-203ENST00000441074 TMEM205Q6UW68 189 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 USP53Q70EK8 1073 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 NPEPL1Q8NDH3 523 aa10.77□□□□□ -0.69
LTBR-203ENST00000441074 ZNF417Q8TAU3 575 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms