RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SEC16AO15027 2179 aa8.22□□□□□ -1.09
HDAC6-209ENST00000440653 SDK2Q58EX2 2172 aa8.21□□□□□ -1.09
HDAC6-209ENST00000440653 WIPF3A6NGB9 483 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 NPIPA5E9PKD4 350 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 AIPO00170 330 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 PLPP3O14495 311 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 PRKNO60260 465 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 NCR1O76036 304 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 UBL3O95164 117 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ATXN8OSP0DMR3 200 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ALOX5APP20292 161 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ACP1P24666 158 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 SHC1P29353 583 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 CASP3P42574 277 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 PITPNBP48739 271 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 FBXW4P57775 412 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 MRPS10P82664 201 aaKnown RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 MC2RQ01718 297 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ROM1Q03395 351 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ZFP36L1Q07352 338 aaKnown RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 FOXF1Q12946 379 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ALKBH1Q13686 389 aaKnown RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 PCOLCEQ15113 449 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 TGIF1Q15583 401 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 TAB1Q15750 504 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 TOMM34Q15785 309 aaPredicted RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 BAK1Q16611 211 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 PLPPR5Q32ZL2 321 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 SLC18B1Q6NT16 456 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 OPN5Q6U736 354 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 RPTNQ6XPR3 784 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 SHISA6Q6ZSJ9 500 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 NRARPQ7Z6K4 114 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 YIPF7Q8N8F6 280 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 SAMD12Q8N8I0 201 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 OR5AK2Q8NH90 309 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 M1APQ8TC57 530 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ELP5Q8TE02 316 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 DUSP19Q8WTR2 217 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 SSC4DQ8WTU2 575 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 RFT1Q96AA3 541 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 MIB2Q96AX9 1013 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ZBTB8AQ96BR9 441 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 DERL3Q96Q80 235 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 OR14A2Q96R54 314 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 DEFB126Q9BYW3 111 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF700Q9H0M5 742 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ZCCHC4Q9H5U6 513 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 PTGES2Q9H7Z7 377 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 MOV10Q9HCE1 1003 aaKnown RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 TIGARQ9NQ88 270 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 RBFOX1Q9NWB1 397 aaKnown RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 TAS2R5Q9NYW4 299 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 IKZF2Q9UKS7 526 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF346Q9UL40 294 aaKnown RBP8.21□□□□□ -1.1
HDAC6-209ENST00000440653 SPATA2Q9UM82 520 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 NPIPA1Q9UND3 350 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 RASD1Q9Y272 281 aa8.21□□□□□ -1.1
HDAC6-209ENST00000440653 SPG11Q96JI7 2443 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 KIF26BQ2KJY2 2108 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 IGLV1-36A0A0B4J1U3 117 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 IGHV3-20A0A0C4DH32 117 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 TRBV5-5A0A0J9YX44 114 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 SMIM30A4D0T7 59 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 C11orf98E9PRG8 122 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 CTDSPLO15194 276 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 ARHGEF9O43307 516 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 LYRM1O43325 122 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 UPK3AO75631 287 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 HRGP04196 525 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 OR8G3PP0DMU2 310 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 CALCBP10092 127 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 EPXP11678 715 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 ELK1P19419 428 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 FOLR3P41439 243 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 RFX2P48378 723 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 EIF2B2P49770 351 aaKnown RBP8.2□□□□□ -1.1
HDAC6-209ENST00000440653 CAPZA1P52907 286 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 CAV3P56539 151 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 OR2B6P58173 313 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 GPR85P60893 370 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 RPS11P62280 158 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC6-209ENST00000440653 INSL4Q14641 139 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 ZNF239Q16600 458 aaKnown RBP8.2□□□□□ -1.1
HDAC6-209ENST00000440653 POMZP3Q6PJE2 187 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 PLET1Q6UQ28 207 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 H1FNTQ75WM6 255 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-209ENST00000440653 NR2C2APQ86WQ0 139 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 PM20D2Q8IYS1 436 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 RDH10Q8IZV5 341 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 OR6V1Q8N148 313 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 OR2Y1Q8NGV0 311 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 GPR148Q8TDV2 347 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 DEDD2Q8WXF8 326 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 ASB10Q8WXI3 467 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 NSMAFQ92636 917 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 TRIM63Q969Q1 353 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 CREB3L1Q96BA8 519 aa8.2□□□□□ -1.1
HDAC6-209ENST00000440653 SLC25A36Q96CQ1 311 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms