RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 IFNA2P01563 188 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 IGHV4-31P0DP07 118 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 MAKP20794 623 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 CCNOP22674 350 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 PRDX6P30041 224 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 CDAP32320 146 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 ALDH3B1P43353 468 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 GPR4P46093 362 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 SLC9A3P48764 834 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 RAP1BP61224 184 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 RAP1AP62834 184 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 MRPS34P82930 218 aaKnown RBP17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 PRKCDQ05655 676 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 ANKDD1AQ495B1 522 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 FGD3Q5JSP0 725 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 C8orf82Q6P1X6 216 aaPredicted RBP17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 HIPK1Q86Z02 1210 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 FNDC8Q8TC99 324 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 SNX33Q8WV41 574 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 CHODLQ9H9P2 273 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 SIAEQ9HAT2 523 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 EGFL7Q9UHF1 273 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 GPR160Q9UJ42 338 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 CDC42EP3Q9UKI2 254 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 ZNF346Q9UL40 294 aaKnown RBP17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 KCNS2Q9ULS6 477 aa17.09■□□□□ 0.33
SHROOM1-204ENST00000440118 IGHV4-61A0A0C4DH41 118 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 LOC100289279A0A1B0GTE1 492 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 A0A1W2PPL8 197 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 MGRN1O60291 552 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 STAMBPO95630 424 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 TCN1P20061 433 aaPredicted RBP17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 MAD2L1BPQ15013 274 aaPredicted RBP17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 FXNQ16595 210 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 FAM166AQ6J272 317 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 MBOAT2Q6ZWT7 520 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 RNF113BQ8IZP6 322 aaKnown RBP17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 BEX2Q9BXY8 128 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 KRCC1Q9NPI7 259 aaPredicted RBP17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 ABCD2Q9UBJ2 740 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 SAMD4AQ9UPU9 718 aaKnown RBP17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 TMEM5Q9Y2B1 443 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 ENPP4Q9Y6X5 453 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 V9GYQ6 96 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 ATRQ13535 2644 aa17.08■□□□□ 0.32
SHROOM1-204ENST00000440118 DNHD1Q96M86 4753 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 XKRYO14609 159 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 FFAR1O14842 300 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 IGHMP01871 453 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 H1F0P07305 194 aaKnown RBP17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 TSPAN19P0C672 248 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 RAD52P43351 418 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 CHN2P52757 468 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 KLF3P57682 345 aaPredicted RBP17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 KRT72Q14CN4 511 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 MSMPQ1L6U9 139 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 ALKBH6Q3KRA9 238 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 PABPC1L2AQ5JQF8 200 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 THEM4Q5T1C6 240 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 GLYATQ6IB77 296 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 LRP11Q86VZ4 500 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 ZNF786Q8N393 782 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 PAQR4Q8N4S7 273 aaPredicted RBP17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 RNF148Q8N7C7 305 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 C11orf40Q8WZ69 217 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 TSPAN32Q96QS1 320 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 BCL2L14Q9BZR8 327 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 SHARPINQ9H0F6 387 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 MYLK2Q9H1R3 596 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 ANKRD19PQ9H560 264 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 GRHPRQ9UBQ7 328 aa17.07■□□□□ 0.32
SHROOM1-204ENST00000440118 A0A087WUU8 490 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 SNX3O60493 162 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 LMX1BO60663 402 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 SNAP29O95721 258 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 NAT2P11245 290 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 ZNF23P17027 643 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 ZNF32P17041 273 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 DRD4P21917 467 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 APEX1P27695 318 aaKnown RBP17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 ZNF133P52736 654 aaPredicted RBP17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 ERVK-25P63136 954 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 TBPL2Q6SJ96 375 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 UNQ6126/PRO20091Q6UXV3 157 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 CLDN22Q8N7P3 220 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 SYNPRQ8TBG9 265 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 FAM46AQ96IP4 442 aaKnown RBP17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 SNX18Q96RF0 628 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 NMNAT1Q9HAN9 279 aaPredicted RBP17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 MYEF2Q9P2K5 600 aaKnown RBP17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 EIF3KQ9UBQ5 218 aaKnown RBP17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 LPAR3Q9UBY5 353 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 UGT2A1Q9Y4X1 527 aa17.06■□□□□ 0.32
SHROOM1-204ENST00000440118 LRP5LA4QPB2 252 aa17.05■□□□□ 0.32
SHROOM1-204ENST00000440118 H7C1C5 153 aa17.05■□□□□ 0.32
SHROOM1-204ENST00000440118 MT-ND5P03915 603 aa17.05■□□□□ 0.32
SHROOM1-204ENST00000440118 MMP7P09237 267 aaPredicted RBP17.05■□□□□ 0.32
SHROOM1-204ENST00000440118 FUT4P22083 530 aa17.05■□□□□ 0.32
SHROOM1-204ENST00000440118 STOMP27105 288 aa17.05■□□□□ 0.32
SHROOM1-204ENST00000440118 GIFP27352 417 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms