RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 L7N2F9 121 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 ARPC3O15145 178 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 SELENOFO60613 162 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF354AO60765 605 aaPredicted RBP12.78□□□□□ -0.36
LIMD1-202ENST00000440097 WISP1O95388 367 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 PLGP00747 810 aaPredicted RBP12.78□□□□□ -0.36
LIMD1-202ENST00000440097 CCL4P13236 92 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 E2F1Q01094 437 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF85Q03923 595 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 IZUMO1Q8IYV9 350 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 STPG2Q8N412 459 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 ZNRF4Q8WWF5 429 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 MR1Q95460 341 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 ZC3H10Q96K80 434 aaKnown RBP12.78□□□□□ -0.36
LIMD1-202ENST00000440097 SPSB2Q99619 263 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 ADAM19Q9H013 955 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 IFT46Q9NQC8 304 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 TAS2R10Q9NYW0 307 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 GNG8Q9UK08 70 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 HRH3Q9Y5N1 445 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 CFAP47Q6ZTR5 3102 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 PSMD9O00233 223 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 SUSD5O60279 629 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 FADS1O60427 444 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 LPLP06858 475 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 NMBP08949 121 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 CDKN2AP42771 156 aaKnown RBP12.78□□□□□ -0.36
LIMD1-202ENST00000440097 PITPNAQ00169 270 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 STK11Q15831 433 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 SFRP5Q5T4F7 317 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 SLC22A10Q63ZE4 541 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 TPRA1Q86W33 373 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 SLC35F2Q8IXU6 374 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 ULBP3Q9BZM4 244 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 HAO2Q9NYQ3 351 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 C19orf25Q9UFG5 118 aaPredicted RBP12.78□□□□□ -0.36
LIMD1-202ENST00000440097 VDAC3Q9Y277 283 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
LIMD1-202ENST00000440097 TMED7-TICAM2A0A0A6YYA0 188 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 KRBOX1C9JBD0 128 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 GMDSO60547 372 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 ASAH2BP0C7U1 165 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF28P17035 718 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 VEGFCP49767 419 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 POLR2HP52434 150 aaKnown RBP12.77□□□□□ -0.36
LIMD1-202ENST00000440097 LRFN4Q6PJG9 635 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 POMGNT2Q8NAT1 580 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 NFAM1Q8NET5 270 aaPredicted RBP12.77□□□□□ -0.36
LIMD1-202ENST00000440097 OR11G2Q8NGC1 345 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 OR5L2Q8NGL0 311 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 OR5J2Q8NH18 312 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 ABHD4Q8TB40 342 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 HAVCR2Q8TDQ0 301 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 LRFN5Q96NI6 719 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 C7orf50Q9BRJ6 194 aaKnown RBP12.77□□□□□ -0.36
LIMD1-202ENST00000440097 OR11A1Q9GZK7 315 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 OR10A4Q9H209 315 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 LDAHQ9H6V9 325 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 MGAT4CQ9UBM8 478 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF346Q9UL40 294 aaKnown RBP12.77□□□□□ -0.36
LIMD1-202ENST00000440097 TMED7Q9Y3B3 224 aa12.77□□□□□ -0.36
LIMD1-202ENST00000440097 TNRC6BQ9UPQ9 1833 aaKnown RBP12.77□□□□□ -0.37
LIMD1-202ENST00000440097 PLSCR5A0PG75 271 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 A8MXK9 166 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 OR6A2O95222 327 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 C4BPBP20851 252 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 SDHAP31040 664 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 GDNFP39905 211 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 SLC26A5P58743 744 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 IL11RAQ14626 422 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 ALKAL2Q6UX46 152 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 SYT9Q86SS6 491 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 LINC00518Q8N0U6 118 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF511Q8NB15 262 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 SEMA4CQ9C0C4 833 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 CA10Q9NS85 328 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 ZMIZ1Q9ULJ6 1067 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 LOC400499M0QZD8 3231 aa12.77□□□□□ -0.37
LIMD1-202ENST00000440097 TRAV36DV7A0A075B6V5 113 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 OR2T7P0C7T2 308 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 RAB3BP20337 219 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 CCKBRP32239 447 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 DIO1P49895 249 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 ZNF385CQ66K41 422 aaPredicted RBP12.76□□□□□ -0.37
LIMD1-202ENST00000440097 SLC23A3Q6PIS1 610 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 DTWD2Q8NBA8 298 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 OR13C5Q8NGS8 318 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 OR2T27Q8NH04 317 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 WDR89Q96FK6 387 aaPredicted RBP12.76□□□□□ -0.37
LIMD1-202ENST00000440097 SEC22CQ9BRL7 303 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 FKRPQ9H9S5 495 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 MED11Q9P086 117 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 PIPOXQ9P0Z9 390 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 PFDN2Q9UHV9 154 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 ING1Q9UK53 422 aaPredicted RBP12.76□□□□□ -0.37
LIMD1-202ENST00000440097 URB1O60287 2271 aaKnown RBP12.76□□□□□ -0.37
LIMD1-202ENST00000440097 A0A1W2PPK0 400 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 XKRYO14609 159 aa12.76□□□□□ -0.37
LIMD1-202ENST00000440097 OR2J2O76002 312 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms