RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 M0QYG6 137 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 GUSBP08236 651 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 APEHP13798 732 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 C4orf46Q504U0 113 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 HLA-DQA1Q5Y7H0 255 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 KRT77Q7Z794 578 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 C9orf40Q8IXQ3 194 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 DUSP19Q8WTR2 217 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 TNFAIP8L1Q8WVP5 186 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 MRPL22Q9NWU5 206 aaKnown RBP12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 MTFP1Q9UDX5 166 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 FREM2Q5SZK8 3169 aa12.22□□□□□ -0.45
HERPUD1-204ENST00000439977 TRBV5-7A0A0A0MS05 114 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 H0YIG0 161 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 LMX1BO60663 402 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 DDAH2O95865 285 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 NUDT1P36639 197 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 PLCXD2Q0VAA5 305 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 GLYATL3Q5SZD4 288 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 LRFN4Q6PJG9 635 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 C3P1Q6ZMU1 363 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 LINC00346Q8IVM7 164 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF721Q8TF20 911 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 MCHR2Q969V1 340 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ADIPOR1Q96A54 375 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 CXorf58Q96LI9 332 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC46A1Q96NT5 459 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ADAM19Q9H013 955 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ETV7Q9Y603 341 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 UNC13CQ8NB66 2214 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 MCRIP1C9JLW8 97 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 SUSD5O60279 629 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 TXNDC12O95881 172 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 BGLAPP02818 100 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 SLC17A1Q14916 467 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ANKRD16Q6P6B7 361 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 LIPHQ8WWY8 451 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ZNF578Q96N58 590 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 ARL6Q9H0F7 186 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 TAS2R4Q9NYW5 299 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 COA3Q9Y2R0 106 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 RNF215Q9Y6U7 377 aa12.21□□□□□ -0.45
HERPUD1-204ENST00000439977 PRSS37A4D1T9 235 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 SOX1O00570 391 aaPredicted RBP12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 EIF1AYO14602 144 aaKnown RBP12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 SHOXO15266 292 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 CSRP1P21291 193 aaKnown RBP12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 OR1D5P58170 312 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 FMODQ06828 376 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 EGR3Q06889 387 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 RBMS2Q15434 407 aaKnown RBP12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 PXDC1Q5TGL8 231 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 CORO6Q6QEF8 472 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 C17orf107Q6ZR85 190 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 LANCL3Q6ZV70 420 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 OR1J4Q8NGS1 313 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 STK35Q8TDR2 534 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 EXO5Q9H790 373 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 MKL2Q9ULH7 1088 aa12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 FARSAQ9Y285 508 aaKnown RBP12.21□□□□□ -0.46
HERPUD1-204ENST00000439977 UBE2QL1A1L167 161 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 OPN1LWP04000 364 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 GIPP09681 153 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 RRASP10301 218 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 PRSS3P35030 304 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 ARL4DP49703 201 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 RASGEF1BQ0VAM2 473 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 EIF2B1Q14232 305 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 EBPQ15125 230 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 ELOCQ15369 112 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 RAB11BQ15907 218 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 TMEM65Q6PI78 240 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 GLRX5Q86SX6 157 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 ABCA7Q8IZY2 2146 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 OR8B4Q96RC9 309 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 ZNF587Q96SQ5 575 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 PTDSS2Q9BVG9 487 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 DHDHQ9UQ10 334 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 EMC9Q9Y3B6 208 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 TMEM14AQ9Y6G1 99 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 CELSR3Q9NYQ7 3312 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 TMEM272A0A1B0GTI8 110 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 LOC101059948A0A1B0GTJ6 334 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 FRG2CA6NGY1 282 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 LGALS8O00214 317 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 EIF1AXP47813 144 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 MRPS10P82664 201 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 SLC36A1Q7Z2H8 476 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 WDFY1Q8IWB7 410 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 JAGN1Q8N5M9 183 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 ABHD6Q9BV23 337 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 LAT2Q9GZY6 243 aa12.2□□□□□ -0.46
HERPUD1-204ENST00000439977 DUSP15Q9H1R2 295 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms