RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ZNF544Q6NX49 715 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 UGT2A3Q6UWM9 527 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 HDDC2Q7Z4H3 204 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 FBXL14Q8N1E6 418 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CPEB3Q8NE35 698 aaKnown RBP11.47□□□□□ -0.57
LINC00399-201ENST00000439008 OR8D4Q8NGM9 314 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 SLCO4A1Q96BD0 722 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 SAMD8Q96LT4 415 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 Q96MF0 132 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 ZNF570Q96NI8 536 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 SMR3AQ99954 134 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CACNG6Q9BXT2 260 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 OR52D1Q9H346 318 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CXorf56Q9H5V9 222 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 EGLN3Q9H6Z9 239 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CBLN4Q9NTU7 201 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 SLC7A8Q9UHI5 535 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 AURKCQ9UQB9 309 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 POMPQ9Y244 141 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 U3KQV3 271 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 CR1P17927 2039 aa11.47□□□□□ -0.57
LINC00399-201ENST00000439008 NSD1Q96L73 2696 aaPredicted RBP11.46□□□□□ -0.57
LINC00399-201ENST00000439008 PRSS37A4D1T9 235 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 A6NIZ1 184 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 TNFRSF11BO00300 401 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 GPRIN2O60269 458 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 DNAJC8O75937 253 aaPredicted RBP11.46□□□□□ -0.57
LINC00399-201ENST00000439008 LY6HO94772 140 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 UBL3O95164 117 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 MPZL1O95297 269 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 GPANK1O95872 356 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 TXNDC12O95881 172 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 TP53P04637 393 aaPredicted RBP11.46□□□□□ -0.57
LINC00399-201ENST00000439008 SERPINA5P05154 406 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 LAP3P28838 519 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 SDHAP31040 664 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 ZNF84P51523 738 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 RAP1BP61224 184 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 RAP1AP62834 184 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 CHRNB3Q05901 458 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 TSPAN31Q12999 210 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 KRR1Q13601 381 aaKnown RBP11.46□□□□□ -0.57
LINC00399-201ENST00000439008 ENDOGQ14249 297 aaKnown RBP11.46□□□□□ -0.57
LINC00399-201ENST00000439008 SGCAQ16586 387 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 RFX4Q33E94 735 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 DNAL1Q4LDG9 190 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 OR2T5Q6IEZ7 315 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 KRT80Q6KB66 452 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 SMARCD3Q6STE5 483 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 ZNF620Q6ZNG0 422 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 DNM1P46Q6ZS02 220 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 SLC16A14Q7RTX9 510 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 NUP37Q8NFH4 326 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 OR2T29Q8NH02 315 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 FANK1Q8TC84 345 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 TSSK2Q96PF2 358 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 CHID1Q9BWS9 393 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 PLA2G12AQ9BZM1 189 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 TRIM15Q9C019 465 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 SYT4Q9H2B2 425 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 GSX1Q9H4S2 264 aaPredicted RBP11.46□□□□□ -0.57
LINC00399-201ENST00000439008 SIAEQ9HAT2 523 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 EMC7Q9NPA0 242 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 STX18Q9P2W9 335 aaKnown RBP11.46□□□□□ -0.57
LINC00399-201ENST00000439008 GRHPRQ9UBQ7 328 aa11.46□□□□□ -0.57
LINC00399-201ENST00000439008 TCRBV3S1A0A5B6 114 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 AQP12BA6NM10 295 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 TMCC2O75069 709 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 KRT36O76013 467 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 RAB36O95755 333 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 OR4A8P0C604 315 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 RAP2AP10114 183 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 ZNF32P17041 273 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 NR4A1P22736 598 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 PAX7P23759 505 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 APEX1P27695 318 aaKnown RBP11.45□□□□□ -0.58
LINC00399-201ENST00000439008 SNTB2Q13425 540 aaKnown RBP11.45□□□□□ -0.58
LINC00399-201ENST00000439008 NRN1LQ496H8 165 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 FAM98BQ52LJ0 330 aaKnown RBP11.45□□□□□ -0.58
LINC00399-201ENST00000439008 PABPC1L2AQ5JQF8 200 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 FAM27BQ5VT28 67 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 FAM205BPQ63HN1 556 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 DPY19L2P2Q6ZN68 376 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 AQP12AQ8IXF9 295 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 OR4F15Q8NGB8 312 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 AKR7LQ8NHP1 331 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 GNPDA2Q8TDQ7 276 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 ERMAPQ96PL5 475 aaPredicted RBP11.45□□□□□ -0.58
LINC00399-201ENST00000439008 RBP7Q96R05 134 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 WNT5BQ9H1J7 359 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 POLE4Q9NR33 117 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
LINC00399-201ENST00000439008 TMCC3Q9ULS5 477 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 ZFHX3Q15911 3703 aa11.45□□□□□ -0.58
LINC00399-201ENST00000439008 LOC100509620A0A075B734 347 aa11.44□□□□□ -0.58
LINC00399-201ENST00000439008 A0A1W2PPL8 197 aa11.44□□□□□ -0.58
LINC00399-201ENST00000439008 DHRS12A0PJE2 317 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms