RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 HSF2BPO75031 334 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ATP6V1G1O75348 118 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 NOL4O94818 638 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 NDUFA7O95182 113 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 LHBP01229 141 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 EPOP01588 193 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 IGHV3-9P01782 118 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 THRBP10828 461 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 PDHBP11177 359 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CD9P21926 228 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CRYGSP22914 178 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 GLRA1P23415 457 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 IL2RGP31785 369 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SOX6P35712 828 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SSR1P43307 286 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 MAGEB1P43366 347 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 XCR1P46094 333 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 NSFP46459 744 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SERPINH1P50454 418 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 UBE2HP62256 183 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCZ1BP86790 482 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCZ1P86791 482 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 GBE1Q04446 702 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF33BQ06732 778 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 PPP1R8Q12972 351 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 RIPK1Q13546 671 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CUL2Q13617 745 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 PPP1R7Q15435 360 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SLC9A3R2Q15599 337 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 OR1C1Q15619 314 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 IL17AQ16552 155 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 HAGHQ16775 308 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 NSUN5P1Q3KNT7 163 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 MAJINQ3KP22 176 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 LRRC23Q53EV4 343 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 MPPE1Q53F39 396 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ATAD3BQ5T9A4 648 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 PRAMEF8Q5VWM4 474 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 TMEM215Q68D42 235 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 HIST2H2AA3Q6FI13 130 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 METAP1DQ6UB28 335 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 AFTPHQ6ULP2 937 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 MFSD7Q6UXD7 560 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ANGPTL8Q6UXH0 198 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SIGLEC15Q6ZMC9 328 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 C1orf186Q6ZWK4 172 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ASPGQ86U10 573 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF589Q86UQ0 364 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 HORMAD1Q86X24 394 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ERI1Q8IV48 349 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 BATF2Q8N1L9 274 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF561Q8N587 486 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 LINC01555Q8NAE3 123 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CCDC197Q8NCU1 140 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 STEAP2Q8NFT2 490 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 RDH11Q8TC12 318 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 M1APQ8TC57 530 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ANKRD49Q8WVL7 239 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ASZ1Q8WWH4 475 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SRSF12Q8WXF0 261 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 GLYATL1Q969I3 302 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CREB3L1Q96BA8 519 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 DTNBP1Q96EV8 351 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 SAMD8Q96LT4 415 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 MED18Q9BUE0 208 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 POLR1EQ9GZS1 481 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 RIBC2Q9H4K1 309 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZNF702PQ9H963 129 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 PATZ1Q9HBE1 687 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CENPMQ9NSP4 180 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZCCHC3Q9NUD5 404 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 KLHL28Q9NXS3 571 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 VPS54Q9P1Q0 977 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ZMAT5Q9UDW3 170 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 FETUBQ9UGM5 382 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 CFAP45Q9UL16 551 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 MRPS7Q9Y2R9 242 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 TDRKHQ9Y2W6 561 aaKnown RBP1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 ATG4BQ9Y4P1 393 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 FAM215AQ9Y5M1 114 aa1.65□□□□□ -2.15
HMGB1P18-201ENST00000438801 NINQ8N4C6 2090 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SYCE3A1L190 88 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 XKRY2A2RUG3 117 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 CTAGE15A4D2H0 777 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 MFSD2BA6NFX1 497 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 ARHGAP42A6NI28 874 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 E7EWF7 191 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 NPIPA2E9PIF3 369 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 CLDN34H7C241 214 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 RAD51BO15315 384 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 MAGEB3O15480 346 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 BUB1O43683 1085 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 PRKAB2O43741 272 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 SPOPO43791 374 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 GMFGO60234 142 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 ANXA9O76027 345 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 CTDNEP1O95476 244 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 YEATS4O95619 227 aa1.64□□□□□ -2.15
HMGB1P18-201ENST00000438801 AK1P00568 194 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms