RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 IL10RAQ13651 578 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 ZMYND11Q15326 602 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 PAPD4Q6PIY7 484 aaKnown RBP12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 C16orf47Q6ZP98 133 aaPredicted RBP12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 OIT3Q8WWZ8 545 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 C8orf44Q96CB5 159 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 NXPE2Q96DL1 559 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 KLHL15Q96M94 604 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 FOXN4Q96NZ1 517 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 SLC26A1Q9H2B4 701 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 ING1Q9UK53 422 aaPredicted RBP12.52□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF593O00488 134 aaPredicted RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 HIST1H2ABP04908 130 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 CLDN12P56749 244 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 MC2RQ01718 297 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 ODF4Q2M2E3 257 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 TMEM255AQ5JRV8 349 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 MRPL14Q6P1L8 145 aaKnown RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 TMEM81Q6P7N7 255 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 Q6ZTK2 550 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 HIST3H2AQ7L7L0 130 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 OR6N2Q8NGY6 317 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 THAP3Q8WTV1 239 aaPredicted RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 LIPHQ8WWY8 451 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 RBPMSQ93062 196 aaKnown RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 HIST1H2ACQ93077 130 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 RNF166Q96A37 237 aaPredicted RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 MRPL48Q96GC5 212 aaKnown RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 WDR77Q9BQA1 342 aaPredicted RBP12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 SEMA4CQ9C0C4 833 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 WDR76Q9H967 626 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 IKZF2Q9UKS7 526 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 ZNF281Q9Y2X9 895 aa12.52□□□□□ -0.41
PTCHD3-201ENST00000438700 MEIKINA0A087WXM9 373 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 A0A1W2PPL8 197 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 POM121CA8CG34 1229 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 ZNF879B4DU55 563 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 IFNA7P01567 189 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 SOX2P48431 317 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 TUSC1Q2TAM9 212 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 LIPNQ5VXI9 398 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 NLRC3Q7RTR2 1065 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 SLC16A9Q7RTY1 509 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 DPY19L4Q7Z388 723 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 GPAT4Q86UL3 456 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 EXD3Q8N9H8 876 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 WBP1Q96G27 269 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 OR2M2Q96R28 347 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 CCNL2Q96S94 520 aaPredicted RBP12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 GFI1Q99684 422 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 ADAM19Q9H013 955 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 NUBP2Q9Y5Y2 271 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 GMDSO60547 372 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 H2AFB2P0C5Z0 115 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 ACSM4P0C7M7 580 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 SULT1A3P0DMM9 295 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 SULT1A4P0DMN0 295 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 SLC25A1P53007 311 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 CPEB2Q7Z5Q1 589 aaKnown RBP12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 PM20D2Q8IYS1 436 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 GSX2Q9BZM3 304 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 SLC39A1Q9NY26 324 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 MRPL39Q9NYK5 338 aaKnown RBP12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 ABRACLQ9P1F3 81 aa12.51□□□□□ -0.41
PTCHD3-201ENST00000438700 CACNA1HO95180 2353 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 LGALS8O00214 317 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 GPRIN2O60269 458 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 AKR7A3O95154 331 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 UBL3O95164 117 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 APEHP13798 732 aaKnown RBP12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 LCN1P31025 176 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 OR5M10Q6IEU7 315 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 HGDQ93099 445 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 MR1Q95460 341 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 ANKRD10Q9NXR5 420 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 GPN3Q9UHW5 284 aaPredicted RBP12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 LAMP5Q9UJQ1 280 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 SPATA2Q9UM82 520 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 EXPH5Q8NEV8 1989 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 TRBV11-1A0A0K0K1C0 115 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 H3BUI4 141 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 M0R233 179 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 SLC25A12O75746 678 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 IGF2P01344 180 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 KLK3P07288 261 aaPredicted RBP12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 CD59P13987 128 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 SLC6A8P48029 635 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 TMEM205Q6UW68 189 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 SERPINA12Q8IW75 414 aa12.5□□□□□ -0.41
PTCHD3-201ENST00000438700 OR2T4Q8NH00 348 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms