RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 TUBB1Q9H4B7 451 aa10.16□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 RLIMQ9NVW2 624 aa10.16□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 GIMAP2Q9UG22 337 aa10.16□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 USH1CQ9Y6N9 552 aa10.16□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 C22orf46C9J442 243 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 SLC28A1O00337 649 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 AHSA1O95433 338 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 SNAP29O95721 258 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 GUSBP08236 651 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 INHBAP08476 426 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 MMP9P14780 707 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 CBLP22681 906 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 ACAA2P42765 397 aaKnown RBP10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 EFNB2P52799 333 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 CAV1Q03135 178 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 TBC1D28Q2M2D7 210 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 SMU1Q2TAY7 513 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 GPAT3Q53EU6 434 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 MRPL2Q5T653 305 aaKnown RBP10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 SLC27A4Q6P1M0 643 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 WDR88Q6ZMY6 472 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 ZCCHC23Q6ZST2 131 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 PDZD9Q8IXQ8 264 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 CLECL1Q8IZS7 167 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 SLC22A24Q8N4F4 322 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 KRTCAP2Q8N6L1 136 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 PPP1R35Q8TAP8 253 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 SLC25A40Q8TBP6 338 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 LRR1Q96L50 414 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 TRIM15Q9C019 465 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 SEMA6AQ9H2E6 1030 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 DPAGT1Q9H3H5 408 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 POLE3Q9NRF9 147 aa10.15□□□□□ -0.78
SMAD9-IT1-201ENST00000437983 IGHV1-69DA0A0B4J2H0 117 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 RNF103-CHMP3A0A140T963 221 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 POC1B-GALNT4F8VUJ3 575 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 MS4A18H0YCH9 400 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 TMEM178BH3BS89 294 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 LSM1O15116 133 aaKnown RBP10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 IGHV1-69P01742 117 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SCG5P05408 212 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 GSTA1P08263 222 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 LINC00032P0C843 101 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 CCNOP22674 350 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 TGFBR2P37173 567 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 WNT5AP41221 380 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 PTGR1Q14914 329 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 MS4A18Q3C1V0 323 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ZNF718Q3SXZ3 478 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 RUNDC3AQ59EK9 446 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SLC35F1Q5T1Q4 408 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ATAD3BQ5T9A4 648 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 NHLRC1Q6VVB1 395 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 GALNT4Q8N4A0 578 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ANKFN1Q8N957 763 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 OR6N1Q8NGY5 312 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 KLF14Q8TD94 323 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 LHX4Q969G2 390 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 COQ8BQ96D53 544 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 CCDC140Q96MF4 163 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 MECRQ9BV79 373 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 OR2J1Q9GZK6 312 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 PPA2Q9H2U2 334 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 CNTD2Q9H8S5 307 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 RNF121Q9H920 327 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 B3GAT2Q9NPZ5 323 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ZDHHC18Q9NUE0 388 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 VPREB3Q9UKI3 123 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ZDHHC8Q9ULC8 765 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 FIS1Q9Y3D6 152 aa10.14□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 P2RY10O00398 339 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 AKAP8O43823 692 aaKnown RBP10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 TOX4O94842 621 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 PRG2P13727 222 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SLC6A2P23975 617 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 GTF2E2P29084 291 aaKnown RBP10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ECHS1P30084 290 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 GRPRP30550 384 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 RPL4P36578 427 aaKnown RBP10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SYPL1Q16563 259 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 WBP2NLQ6ICG8 309 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 PIWIL3Q7Z3Z3 882 aaKnown RBP10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SLC22A9Q8IVM8 553 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 WFDC9Q8NEX5 89 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 MUC7Q8TAX7 377 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 MIPOL1Q8TD10 442 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 C10orf82Q8WW14 230 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ITLN1Q8WWA0 313 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 LRTOMTQ8WZ04 291 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 TAAR8Q969N4 342 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 UTP4Q969X6 686 aaKnown RBP10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 NEIL1Q96FI4 390 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SAMD8Q96LT4 415 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 Q96M66 194 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 TMEM246Q9BRR3 403 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SLC38A1Q9H2H9 487 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 MIOXQ9UGB7 285 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 PPP1R3CQ9UQK1 317 aa10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SF3B6Q9Y3B4 125 aaKnown RBP10.13□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 LOC102725191A0A1B0GVB3 256 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms