RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OR9A2Q8NGT5 310 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 FOXRED1Q96CU9 486 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ATG101Q9BSB4 218 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 RGCCQ9H4X1 137 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 CLDND1Q9NY35 253 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 PPP4R1LQ9P1A2 415 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 IKZF2Q9UKS7 526 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ADAM18Q9Y3Q7 739 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 SCN5AQ14524 2016 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 FITM1A5D6W6 292 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF705FA8MVS1 300 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 SLC31A2O15432 143 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 OGG1O15527 345 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ASGR1P07306 291 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF705DP0CH99 300 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF705BP0CI00 300 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 AGAP20933 346 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 GATMP50440 423 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 LMAN2Q12907 356 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 IRF4Q15306 451 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 RPL22L1Q6P5R6 122 aaKnown RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 C17orf64Q86WR6 236 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF511Q8NB15 262 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 UBAC2Q8NBM4 344 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 BHLHE23Q8NDY6 225 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 NUP43Q8NFH3 380 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 NLGN2Q8NFZ4 835 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ZCCHC10Q8TBK6 192 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 KIAA1671Q9BY89 1806 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ASCC3Q8N3C0 2202 aaKnown RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 RCBTB2O95199 551 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 PLGP00747 810 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 DBIP07108 87 aaKnown RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 RCC1P18754 421 aaPredicted RBP6.8□□□□□ -1.32
CPSF6-202ENST00000435070 HTR5AP47898 357 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 IL13RA1P78552 427 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 PRSS58Q8IYP2 241 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ALG14Q96F25 216 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 RAB33BQ9H082 229 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 OR2AG1Q9H205 316 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 SEC61A2Q9H9S3 476 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 INPP5EQ9NRR6 644 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 AMDHD2Q9Y303 409 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 WDR45Q9Y484 360 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 COLEC10Q9Y6Z7 277 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 MSGN1A6NI15 193 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 MBTPS2O43462 519 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 KLF4O43474 513 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 LAMP2P13473 410 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 LPAR6P43657 344 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 MST1LQ2TV78 715 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 FRMD1Q8N878 549 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 OR5AR1Q8NGP9 310 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 SYT4Q9H2B2 425 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 BCL2L10Q9HD36 194 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF281Q9Y2X9 895 aa6.8□□□□□ -1.32
CPSF6-202ENST00000435070 MYOFQ9NZM1 2061 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CRTAPO75718 401 aaPredicted RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 AHSA1O95433 338 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 HCKP08631 526 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 DNASE1L1P49184 302 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 POU3F4P49335 361 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 DHPSP49366 369 aaPredicted RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CXADRP78310 365 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 PPP1R1AQ13522 171 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 FAM111BQ6SJ93 734 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 TAS1R1Q7RTX1 841 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 FGF13Q92913 245 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 SLC25A36Q96CQ1 311 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CNN2Q99439 309 aaKnown RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 SPACA1Q9HBV2 294 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 IER3IP1Q9Y5U9 82 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 URGCP-MRPS24S4R325 110 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 A0A087WV62 115 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 SLC5A10A0PJK1 596 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ZNF749O43361 778 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 IGHV2-5P01817 119 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CD74P04233 296 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 OR1D2P34982 312 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 LSSP48449 732 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 RGS19P49795 217 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 MECP2P51608 486 aaKnown RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ACTC1P68032 377 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ACTA1P68133 377 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 ADAM8P78325 824 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 EBPQ15125 230 aaKnown RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 PAPD4Q6PIY7 484 aaKnown RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 GTF2H5Q6ZYL4 71 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 OR51A4Q8NGJ6 313 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CNRIP1Q96F85 164 aaPredicted RBP6.79□□□□□ -1.32
CPSF6-202ENST00000435070 KIRREL1Q96J84 757 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 TSSK2Q96PF2 358 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 POTEKPQ9BYX7 375 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 CST11Q9H112 138 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 UPB1Q9UBR1 384 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 FGF16O43320 207 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 SOX15O60248 233 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 DOK2O60496 412 aa6.79□□□□□ -1.32
CPSF6-202ENST00000435070 HIST1H1CP16403 213 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms