RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 ABHD4Q8TB40 342 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 MRPL13Q9BYD1 178 aaKnown RBP15.23■□□□□ 0.03
RIF1-204ENST00000430328 ZMAT3Q9HA38 289 aaKnown RBP15.23■□□□□ 0.03
RIF1-204ENST00000430328 SPATA6Q9NWH7 488 aaPredicted RBP15.23■□□□□ 0.03
RIF1-204ENST00000430328 ASIC5Q9NY37 505 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 M0R1X1 148 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 RXFP4Q8TDU9 374 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 C11orf54Q9H0W9 315 aaPredicted RBP15.23■□□□□ 0.03
RIF1-204ENST00000430328 AAMDCQ9H7C9 122 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 USP32Q8NFA0 1604 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 BLACEA4D250 179 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 A6NDN8 102 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 TRABD2BA6NFA1 517 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 ITGB7P26010 798 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 PREX2Q70Z35 1606 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 QDPRP09417 244 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 OR8G3PP0DMU2 310 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 SLC35G1Q2M3R5 365 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 TFAP2EQ6VUC0 442 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 OR51H1Q8NH63 302 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 FAM3DQ96BQ1 224 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 DDOQ99489 341 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 NTPCRQ9BSD7 190 aaKnown RBP15.23■□□□□ 0.03
RIF1-204ENST00000430328 PECRQ9BY49 303 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 SCN2AQ99250 2005 aa15.23■□□□□ 0.03
RIF1-204ENST00000430328 KIR2DS1A0A191URI9 304 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 C5AR1P21730 350 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 KIR2DS4P43632 304 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 MFAP5Q13361 173 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 KIR2DS1Q14954 304 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 MRGPRX2Q96LB1 330 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 AKIRIN1Q9H9L7 192 aaPredicted RBP15.22■□□□□ 0.03
RIF1-204ENST00000430328 SIRT3Q9NTG7 399 aaPredicted RBP15.22■□□□□ 0.03
RIF1-204ENST00000430328 CD1BP29016 333 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 OR3A1P47881 315 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 HERVK_113P61574 105 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 Q499Y3 187 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 C9orf135Q5VTT2 229 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 DRAM2Q6UX65 266 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 B3GALT5Q9Y2C3 310 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 A0A1W2PQU0 124 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 DHRS13Q6UX07 377 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 NAXDQ8IW45 347 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 BOD1Q96IK1 185 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 HS3ST1O14792 307 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 CD46P15529 392 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 FRMPD2BQ6IN97 320 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 GATA6Q92908 595 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 CXorf58Q96LI9 332 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 SLC30A3Q99726 388 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 SMG9Q9H0W8 520 aaKnown RBP15.22■□□□□ 0.03
RIF1-204ENST00000430328 CCR9P51686 369 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 SUOXP51687 545 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 CIB3Q96Q77 187 aaPredicted RBP15.22■□□□□ 0.03
RIF1-204ENST00000430328 XYLT2Q9H1B5 865 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 PPP1R3CQ9UQK1 317 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 CRISP2P16562 243 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 FAM131CQ96AQ9 280 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 GPR173Q9NS66 373 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 TBX19O60806 448 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 F13BP05160 661 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 SULT1A1P50225 295 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 OR2G6Q5TZ20 316 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 MTMR14Q8NCE2 650 aa15.22■□□□□ 0.03
RIF1-204ENST00000430328 SDR39U1Q9NRG7 319 aaPredicted RBP15.22■□□□□ 0.03
RIF1-204ENST00000430328 TRBV11-1A0A0K0K1C0 115 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 FAM87AP0C7U9 286 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 CPEB3Q8NE35 698 aaKnown RBP15.21■□□□□ 0.03
RIF1-204ENST00000430328 MS4A10Q96PG2 267 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 DLL4Q9NR61 685 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 SPINT3P49223 89 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 PCBP4P57723 403 aaKnown RBP15.21■□□□□ 0.03
RIF1-204ENST00000430328 ATP1B1P05026 303 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 DSC1Q08554 894 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 OR51S1Q8NGJ8 323 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 PHYHIPQ92561 330 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 RPL3LQ92901 407 aaKnown RBP15.21■□□□□ 0.03
RIF1-204ENST00000430328 TMEM230Q96A57 120 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 EGLN1Q9GZT9 426 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 ZFAND5O76080 213 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 ABCD3P28288 659 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 OR13F1Q8NGS4 319 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 PINX1Q96BK5 328 aaKnown RBP15.21■□□□□ 0.03
RIF1-204ENST00000430328 DMRT3Q9NQL9 472 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 GPR55Q9Y2T6 319 aaPredicted RBP15.21■□□□□ 0.03
RIF1-204ENST00000430328 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
RIF1-204ENST00000430328 BMP5P22003 454 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 GALR1P47211 349 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 GPR12P47775 334 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 GATMP50440 423 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 MTURNQ8N3F0 131 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 ZNF485Q8NCK3 441 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 TMED6Q8WW62 240 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 ZCWPW2A0A1B0GU75 182 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 NPIPB15A6NHN6 443 aaPredicted RBP15.21■□□□□ 0.02
RIF1-204ENST00000430328 GALR3O60755 368 aaPredicted RBP15.21■□□□□ 0.02
RIF1-204ENST00000430328 CD37P11049 281 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 ADPRHP54922 357 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 OR5M10Q6IEU7 315 aa15.21■□□□□ 0.02
RIF1-204ENST00000430328 EDEM2Q9BV94 578 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms