RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 SLC35E2P0CK97 266 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 GABRA1P14867 456 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 NR0B1P51843 470 aaKnown RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 CAPZA1P52907 286 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 ZNF169Q14929 603 aaPredicted RBP11.3□□□□□ -0.6
CDH3-202ENST00000429102 FAM122CQ6P4D5 195 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 BPIFB2Q8N4F0 458 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 TSPAN32Q96QS1 320 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 EVA1AQ9H8M9 152 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 HAO2Q9NYQ3 351 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 STEAP1Q9UHE8 339 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 CYP8B1Q9UNU6 501 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 DHDHQ9UQ10 334 aa11.3□□□□□ -0.6
CDH3-202ENST00000429102 A0A1B0GV50 99 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 SHISA8B8ZZ34 492 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 DISC1C4P0D8 188 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 MC2RQ01718 297 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 CSRP2Q16527 193 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 ZNF660Q6AZW8 331 aaPredicted RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 TSNAXQ99598 290 aaKnown RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 EMC6Q9BV81 110 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 PARP12Q9H0J9 701 aaKnown RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 WDR13Q9H1Z4 485 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 HPF1Q9NWY4 346 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 SERTAD3Q9UJW9 196 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 TMEM184BQ9Y519 407 aaPredicted RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 IGKV1D-42A0A075B6H8 117 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 TCRBV21S2A2A0A5A6 115 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 TMEM82A0PJX8 343 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 ZNF705EA8MWA4 302 aaPredicted RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 CYB5AP00167 134 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 AKAIN1P0CW23 69 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 RPS4Y1P22090 263 aaKnown RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 FMODQ06828 376 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 UBXN2BQ14CS0 331 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 HACD4Q5VWC8 232 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 C12orf45Q8N5I9 185 aaPredicted RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 PAQR8Q8TEZ7 354 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 NPRL2Q8WTW4 380 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 TREM1Q9NP99 234 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 WDFY4Q6ZS81 3184 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 OR2AT4A6NND4 320 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 PLRG1O43660 514 aaKnown RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 GSTZ1O43708 216 aaPredicted RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 RAB40ALP0C0E4 278 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 RNH1P13489 461 aaKnown RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 CBR1P16152 277 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 FCARP24071 287 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 FBXW4P57775 412 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 MFGE8Q08431 387 aaPredicted RBP11.29□□□□□ -0.6
CDH3-202ENST00000429102 TMEM151BQ8IW70 566 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 NT5CQ8TCD5 201 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 SLC2A12Q8TD20 617 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 SCARB1Q8WTV0 552 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 RAB40AQ8WXH6 277 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 TM4SF19Q96DZ7 209 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 MESP1Q9BRJ9 268 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 TPSD1Q9BZJ3 242 aa11.29□□□□□ -0.6
CDH3-202ENST00000429102 FRYQ5TBA9 3013 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 LOC101059948A0A1B0GTJ6 334 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 FARS2O95363 451 aaKnown RBP11.28□□□□□ -0.6
CDH3-202ENST00000429102 OR4E1P0C645 316 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 SMIM10L1P0DMW3 83 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 CD53P19397 219 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 TPMTP51580 245 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 GFERP55789 205 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 SLC16A9Q7RTY1 509 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 TMEM200AQ86VY9 491 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 CMIPQ8IY22 773 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 FLVCR1-AS1Q8TAF5 88 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 SMIM10Q96HG1 83 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 VSTM2LQ96N03 204 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 VRK1Q99986 396 aaPredicted RBP11.28□□□□□ -0.6
CDH3-202ENST00000429102 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 SLC6A15Q9H2J7 730 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 VDAC3Q9Y277 283 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 A0A0J9YY10 115 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 OR5K3A6NET4 321 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 NAP1L6A6NFF2 107 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 MFSD2BA6NFX1 497 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 OR4C45A6NMZ5 311 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 H3BML4 177 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 P2RY10O00398 339 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 FADS1O60427 444 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 HLA-DOBP13765 273 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 CD34P28906 385 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 PRKXP51817 358 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 ATP1B3P54709 279 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 ZNF74Q16587 644 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 GABRG1Q8N1C3 465 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 TEX19Q8NA77 164 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 MRGPRX1Q96LB2 322 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 REG4Q9BYZ8 158 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 APMAPQ9HDC9 416 aa11.28□□□□□ -0.6
CDH3-202ENST00000429102 IFT46Q9NQC8 304 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms