RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 DYNLRB1Q9NP97 96 aa13.27□□□□□ -0.29
TSPO-204ENST00000428336 RPS6KA6Q9UK32 745 aa13.27□□□□□ -0.29
TSPO-204ENST00000428336 HIF3AQ9Y2N7 669 aa13.27□□□□□ -0.29
TSPO-204ENST00000428336 IGKV1D-43A0A0B4J1Z2 117 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 HTR3EA5X5Y0 456 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 AQP12BA6NM10 295 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 ARPC2O15144 300 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 PRSS23O95084 383 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 FARS2O95363 451 aaKnown RBP13.26□□□□□ -0.29
TSPO-204ENST00000428336 IFNW1P05000 195 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 IFI30P13284 250 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 MAKP20794 623 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 GIFP27352 417 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 IFNA8P32881 189 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 MSX2P35548 267 aaPredicted RBP13.26□□□□□ -0.29
TSPO-204ENST00000428336 MS4A2Q01362 244 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 GALK2Q01415 458 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 FHL1Q13642 323 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 SLC16A14Q7RTX9 510 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 DPPA2Q7Z7J5 298 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 LRP11Q86VZ4 500 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 MEX3DQ86XN8 651 aaKnown RBP13.26□□□□□ -0.29
TSPO-204ENST00000428336 AQP12AQ8IXF9 295 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 OFCC1Q8IZS5 231 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 PAQR4Q8N4S7 273 aaPredicted RBP13.26□□□□□ -0.29
TSPO-204ENST00000428336 LRRC75AQ8NAA5 344 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 SLC30A7Q8NEW0 376 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 KCNK17Q96T54 332 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 TXNIPQ9H3M7 391 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 STX18Q9P2W9 335 aaKnown RBP13.26□□□□□ -0.29
TSPO-204ENST00000428336 RHCGQ9UBD6 479 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 SAMD4AQ9UPU9 718 aaKnown RBP13.26□□□□□ -0.29
TSPO-204ENST00000428336 UGT2A1Q9Y4X1 527 aa13.26□□□□□ -0.29
TSPO-204ENST00000428336 RTTNQ86VV8 2226 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 SYNGR3O43761 229 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 MGRN1O60291 552 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 SLC2A10O95528 541 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 ZNF682O95780 498 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 ERCC1P07992 297 aaPredicted RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 MMP7P09237 267 aaPredicted RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 CCL2P13500 99 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 NCK1P16333 377 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 ZNF16P17020 682 aaPredicted RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 ZNF84P51523 738 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 RPS23P62266 143 aaKnown RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 PRKCDQ05655 676 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 CHRFAM7AQ494W8 412 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 SLC36A2Q495M3 483 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 IFI44LQ53G44 452 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 ALG10Q5BKT4 473 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 TMEM53Q6P2H8 277 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 SLC25A47Q6Q0C1 308 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 TSEN54Q7Z6J9 526 aaKnown RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 NRMQ8IXM6 262 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 ZNF786Q8N393 782 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 ZNF540Q8NDQ6 660 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 GEMIN6Q8WXD5 167 aaKnown RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 SYT3Q9BQG1 590 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 FNDC11Q9BVV2 318 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 TPK1Q9H3S4 243 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 RNF121Q9H920 327 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 SMURF2Q9HAU4 748 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 DCAF13Q9NV06 445 aaKnown RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 TMEM160Q9NX00 188 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 MYEF2Q9P2K5 600 aaKnown RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 REV1Q9UBZ9 1251 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 ZNF346Q9UL40 294 aaKnown RBP13.25□□□□□ -0.29
TSPO-204ENST00000428336 FZR1Q9UM11 496 aa13.25□□□□□ -0.29
TSPO-204ENST00000428336 CHD3Q12873 2000 aaKnown RBP13.24□□□□□ -0.29
TSPO-204ENST00000428336 ANKRD65E5RJM6 399 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 M0R233 179 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 SERPINA1P01009 418 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 IGHMP01871 453 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 APEHP13798 732 aaKnown RBP13.24□□□□□ -0.29
TSPO-204ENST00000428336 ZNF23P17027 643 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 CDAP32320 146 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 ALDH3B1P43353 468 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 GZMKP49863 264 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 ACTR3P61158 418 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
TSPO-204ENST00000428336 MRPS34P82930 218 aaKnown RBP13.24□□□□□ -0.29
TSPO-204ENST00000428336 FMODQ06828 376 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 TOP3AQ13472 1001 aaPredicted RBP13.24□□□□□ -0.29
TSPO-204ENST00000428336 RIN1Q13671 783 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 TRAM2Q15035 370 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 TAF11Q15544 211 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 IQCCQ4KMZ1 466 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 TBPL2Q6SJ96 375 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 FKBP9P1Q75LS8 142 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 LRRC18Q8N456 261 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 OR51A7Q8NH64 312 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 UBASH3BQ8TF42 649 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 ACOT11Q8WXI4 607 aaPredicted RBP13.24□□□□□ -0.29
TSPO-204ENST00000428336 NSMAFQ92636 917 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 NABP1Q96AH0 204 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 MSI2Q96DH6 328 aaKnown RBP13.24□□□□□ -0.29
TSPO-204ENST00000428336 HSH2DQ96JZ2 352 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 MS4A5Q9H3V2 200 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 SIAEQ9HAT2 523 aa13.24□□□□□ -0.29
TSPO-204ENST00000428336 TRAV27A0A087WT01 109 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms