RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CALYQ9NYX4 217 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 PCYOX1Q9UHG3 505 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 SLC7A8Q9UHI5 535 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF639Q9UID6 485 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 IKZF2Q9UKS7 526 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 TRAPPC4Q9Y296 219 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 ASB3Q9Y575 518 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 PEX16Q9Y5Y5 336 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 AKAP11Q9UKA4 1901 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 STRCQ7RTU9 1775 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CASZ1Q86V15 1759 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 NHSL1Q5SYE7 1610 aa1.61□□□□□ -2.15
PTPRC-208ENST00000427110 CICQ96RK0 1608 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 USP42Q9H9J4 1324 aaKnown RBP1.61□□□□□ -2.15
PTPRC-208ENST00000427110 MYO5AQ9Y4I1 1855 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 ADCY9O60503 1353 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 MYH6P13533 1939 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 A0A1B0GUL6 1792 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 IGLV3-22A0A075B6J6 115 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PPIAL4EA0A075B759 164 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CIB4A0PJX0 185 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 NKX2-6A6NCS4 301 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 TMX2-CTNND1H3BSU7 103 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 LAD1O00515 517 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PES1O00541 588 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 DYNC1I1O14576 645 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 MAGEB4O15481 346 aaPredicted RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 SOX15O60248 233 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 SERPIND1P05546 499 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 C2P06681 752 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 GKN3PP0CG01 181 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PPIAL4FP0DN26 164 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CALM1P0DP23 149 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CALM2P0DP24 149 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CALM3P0DP25 149 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 MCF2P10911 925 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 TNNI1P19237 187 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CHMLP26374 656 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 IFNA8P32881 189 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 FDFT1P37268 417 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 TAGLN2P37802 199 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 GPR6P46095 362 aaPredicted RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 SUB1P53999 127 aaKnown RBP eCLIP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 GGTLC2Q14390 218 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CAPRIN1Q14444 709 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 GPNMBQ14956 572 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 TGFBIQ15582 683 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 KLHL40Q2TBA0 621 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 KCTD21Q4G0X4 260 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 COA6Q5JTJ3 125 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PRAMEF5Q5TYX0 476 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PRAMEF6Q5VXH4 476 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 FRMPD2BQ6IN97 320 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF621Q6ZSS3 439 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 C6orf120Q7Z4R8 191 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 EGFL6Q8IUX8 553 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PSTKQ8IV42 348 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PUSL1Q8N0Z8 303 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 Q8N9L7 120 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 OR10G9Q8NGN4 311 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 MCOLN3Q8TDD5 553 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF606Q8WXB4 792 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 FGF14Q92915 247 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 SGK3Q96BR1 496 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 DNAJC19Q96DA6 116 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 FAM210BQ96KR6 192 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 C12orf42Q96LP6 360 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 RARRES2Q99969 163 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 KCTD14Q9BQ13 255 aaPredicted RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 MFFQ9GZY8 342 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 NIPAL2Q9H841 368 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 NT5MQ9NPB1 228 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 KLHL28Q9NXS3 571 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF226Q9NYT6 803 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 SPATA7Q9P0W8 599 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CLCF1Q9UBD9 225 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 GNPTGQ9UJJ9 305 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 HPCAL4Q9UM19 191 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PRG3Q9Y2Y8 225 aaPredicted RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 WSB1Q9Y6I7 421 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 IKBKGQ9Y6K9 419 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 DOCK2Q92608 1830 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 C1orf167Q5SNV9 1468 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PXDNQ92626 1479 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 PLCH1Q4KWH8 1693 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 ZNF831Q5JPB2 1677 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 TTC41PQ6P2S7 1318 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 MAP3K15Q6ZN16 1313 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 ARAP2Q8WZ64 1704 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.6□□□□□ -2.15
PTPRC-208ENST00000427110 NWD2Q9ULI1 1742 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 TOGARAM1Q9Y4F4 1720 aa1.6□□□□□ -2.15
PTPRC-208ENST00000427110 CPDO75976 1380 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 RFX7Q2KHR2 1363 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 JCADQ9P266 1359 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 LAMB2P55268 1798 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 LRRK1Q38SD2 2015 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 LRP6O75581 1613 aa1.59□□□□□ -2.15
PTPRC-208ENST00000427110 COL22A1Q8NFW1 1626 aaPredicted RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms