RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TMED6Q8WW62 240 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 DVL3Q92997 716 aaPredicted RBP14.54□□□□□ -0.08
PKP4-205ENST00000426248 MICU1Q9BPX6 476 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 TAS2R5Q9NYW4 299 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 COPS7AQ9UBW8 275 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 TRIOO75962 3097 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 SHISA7A6NL88 538 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 GP1BAP07359 652 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 MGMTP16455 207 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 MAOAP21397 527 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 SOX2P48431 317 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 GPR143P51810 404 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 ZIC1Q15915 447 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 TMEM99Q8N816 258 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 OR51L1Q8NGJ5 315 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 NUBPLQ8TB37 319 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 SYNPRQ8TBG9 265 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 CLDN23Q96B33 292 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 TOLLIPQ9H0E2 274 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 HEATR5BQ9P2D3 2071 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 A0A0B4J2A0 478 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 A0A1W2PR77 199 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 NAP1L6A6NFF2 107 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 ITGA10O75578 1167 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 APEHP13798 732 aaKnown RBP14.54□□□□□ -0.08
PKP4-205ENST00000426248 PCP4P48539 62 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 ZNF658BQ4V348 819 aaPredicted RBP14.54□□□□□ -0.08
PKP4-205ENST00000426248 YOD1Q5VVQ6 348 aaPredicted RBP14.54□□□□□ -0.08
PKP4-205ENST00000426248 MAMSTRQ6ZN01 415 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 ZNF383Q8NA42 475 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 DTWD2Q8NBA8 298 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 MR1Q95460 341 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 FGF20Q9NP95 211 aaPredicted RBP14.54□□□□□ -0.08
PKP4-205ENST00000426248 SHPKQ9UHJ6 478 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 PCDHGA5Q9Y5G8 931 aa14.54□□□□□ -0.08
PKP4-205ENST00000426248 PSMD9O00233 223 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 FGF17O60258 216 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 AQP8O94778 261 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 NTN1O95631 604 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 IGLV3-19P01714 112 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 ERGP11308 486 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 EDNRAP25101 427 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 PRKXP51817 358 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 HMGA2P52926 109 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 NDUFA6P56556 154 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 H2BFSP57053 126 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 TRMT12Q53H54 448 aaKnown RBP14.53□□□□□ -0.08
PKP4-205ENST00000426248 NKAPLQ5M9Q1 402 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 SAMD8Q96LT4 415 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 GPATCH2Q9NW75 528 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 OR6C76A6NM76 312 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 PRKNO60260 465 aaPredicted RBP14.53□□□□□ -0.08
PKP4-205ENST00000426248 OR12D2P58182 307 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 KLF9Q13886 244 aaPredicted RBP14.53□□□□□ -0.08
PKP4-205ENST00000426248 SIRT4Q9Y6E7 314 aaPredicted RBP14.53□□□□□ -0.08
PKP4-205ENST00000426248 A0A0A6YYD5 115 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 NDUFB7P17568 137 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 SLC25A45Q8N413 288 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 SPICQ8N5J4 248 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 SIRT6Q8N6T7 355 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 FAM98AQ8NCA5 519 aaKnown RBP14.53□□□□□ -0.08
PKP4-205ENST00000426248 STEAP2Q8NFT2 490 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 CDS1Q92903 461 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 PNPLA2Q96AD5 504 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 RAB3CQ96E17 227 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 Q9N2J8 555 aa14.53□□□□□ -0.08
PKP4-205ENST00000426248 IGHV1OR21-1A0A087WYE8 117 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 A0A0D9SG52 128 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 A0A1B0GV50 99 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 hCG_1809904A0A1W2PP81 198 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 A0A1W2PR64 198 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 A0A1W2PRV1 198 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 G3V3Q6 166 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 ZNF749O43361 778 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 GALR3O60755 368 aaPredicted RBP14.52□□□□□ -0.08
PKP4-205ENST00000426248 DAOP14920 347 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 FASLGP48023 281 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 PLEKHN1Q494U1 663 aaPredicted RBP14.52□□□□□ -0.08
PKP4-205ENST00000426248 MUC20Q8N307 709 aaPredicted RBP14.52□□□□□ -0.08
PKP4-205ENST00000426248 SLC16A11Q8NCK7 471 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 RASL12Q9NYN1 266 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 GNG8Q9UK08 70 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 CXorf65A6NEN9 183 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 K7ESF4 209 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 KCNAB3O43448 404 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 ZNF432O94892 652 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 JMJD7P0C870 316 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 GPX4P36969 197 aaPredicted RBP14.52□□□□□ -0.08
PKP4-205ENST00000426248 NAA10P41227 235 aaPredicted RBP14.52□□□□□ -0.08
PKP4-205ENST00000426248 RPS10P46783 165 aaKnown RBP14.52□□□□□ -0.08
PKP4-205ENST00000426248 BTG2P78543 158 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 ZNF626Q68DY1 528 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 FRRS1Q6ZNA5 592 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 RNF165Q6ZSG1 346 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 CDK20Q8IZL9 346 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 FAM71CQ8NEG0 241 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 THEM6Q8WUY1 208 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 POM121Q96HA1 1249 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 ZNF354BQ96LW1 612 aa14.52□□□□□ -0.08
PKP4-205ENST00000426248 OR14A2Q96R54 314 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms