RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RASGEF1BQ0VAM2 473 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 BAMBIQ13145 260 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ETFDHQ16134 617 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 GLYATL3Q5SZD4 288 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 LIN54Q6MZP7 749 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM122CQ6P4D5 195 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 ATRAIDQ6UW56 229 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 CDH26Q8IXH8 852 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 JAGN1Q8N5M9 183 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 OR1S1Q8NH92 325 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 METTL21AQ8WXB1 218 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 FBXW5Q969U6 566 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 CMKLR1Q99788 373 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 DPYSL5Q9BPU6 564 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 B3GNT4Q9C0J1 378 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 NXF5Q9H1B4 397 aaKnown RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM14AQ9Y6G1 99 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 TNRC18O15417 2968 aaPredicted RBP6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 REV3LO60673 3130 aa6.81□□□□□ -1.32
SMARCC1-202ENST00000425518 LOC100289279A0A1B0GTE1 492 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM82A0PJX8 343 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 A8MXK9 166 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 D6RAR5 112 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CCSO14618 274 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TNFRSF10CO14798 259 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 LINC01565O15544 149 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SRPX2O60687 465 aaPredicted RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 UTS2O95399 124 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 PNPP00491 289 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 OR4E1P0C645 316 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 ASAH2BP0C7U1 165 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 MST1P26927 711 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TPMTP51580 245 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TOMM34Q15785 309 aaPredicted RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CD163Q86VB7 1156 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF440Q8IYI8 595 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 C19orf47Q8N9M1 422 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 STEAP2Q8NFT2 490 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 OR5M9Q8NGP3 310 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 MAP3K3Q99759 626 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SEMA6CQ9H3T2 930 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 DHDHQ9UQ10 334 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 FITM1A5D6W6 292 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 ARID1AO14497 2285 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 WNT11O96014 354 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CTRB1P17538 263 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 NAT1P18440 290 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CSF2RBP32927 897 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 UBE2IP63279 158 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SPOCK1Q08629 439 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 PTPRSQ13332 1948 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF273Q14593 569 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC17A1Q14916 467 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 EEF1A1P5Q5VTE0 462 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CTRB2Q6GPI1 263 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM184AQ6ZMB5 413 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 PRSS58Q8IYP2 241 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 KDM8Q8N371 416 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 OR1J4Q8NGS1 313 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 OR10K1Q8NGX5 313 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 MCHR2Q969V1 340 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 MNTQ99583 582 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 GABRG3Q99928 467 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 PLEKHA6Q9Y2H5 1048 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 NOP16Q9Y3C1 178 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 A0A1B0GTQ1 180 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 BET1O15155 118 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TMEM127O75204 238 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 ALOX12BO75342 701 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SNAPC5O75971 98 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 FGF2P09038 288 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 APEHP13798 732 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 MECP2P51608 486 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 EGR3Q06889 387 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 EIF2B5Q13144 721 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SKP2Q13309 424 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CHRDL2Q6WN34 429 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 GALNT16Q8N428 558 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM160A2Q8N612 972 aaPredicted RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF615Q8N8J6 731 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CLEC1AQ8NC01 280 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 OR4S1Q8NGB4 309 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 OTOSQ8NHW6 89 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 PHOSPHO2Q8TCD6 241 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 CCDC107Q8WV48 283 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SEH1LQ96EE3 360 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TOE1Q96GM8 510 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 AIFM2Q9BRQ8 373 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 EXOSC3Q9NQT5 275 aaKnown RBP6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SOHLH2Q9NX45 425 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TAS2R4Q9NYW5 299 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 TAS2R3Q9NYW6 316 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 UPB1Q9UBR1 384 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 PRODH2Q9UF12 536 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 B9D1Q9UPM9 204 aa6.8□□□□□ -1.32
SMARCC1-202ENST00000425518 SPEGQ15772 3267 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 PCP4L1A6NKN8 68 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC17A2O00624 439 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 TOR1AO14656 332 aa6.79□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC25A12O75746 678 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms