RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 UCHL1P09936 223 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 CSNK2A1P68400 391 aaPredicted RBP23.63■■□□□ 1.37
LDB1-202ENST00000425280 SLC17A1Q14916 467 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 HSPB2Q16082 182 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 THEM4Q5T1C6 240 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 DDI2Q5TDH0 399 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 Q6ZNX1 250 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 LINC00696Q6ZRV3 163 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 ZNF454Q8N9F8 522 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 KCNE4Q8WWG9 221 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 ABHD6Q9BV23 337 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 PLA2G3Q9NZ20 509 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 V9GYH0 126 aa23.63■■□□□ 1.37
LDB1-202ENST00000425280 A0A1B0GTH9 108 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 ZNF823P16415 610 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 ROM1Q03395 351 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 OR1C1Q15619 314 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 YIF1BQ5BJH7 314 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 TRILQ7L0X0 811 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 ZNF679Q8IYX0 411 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 CHPT1Q8WUD6 406 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 FAM173AQ9BQD7 235 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 OR2B2Q9GZK3 357 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 KLHL9Q9P2J3 617 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 BOKQ9UMX3 212 aaPredicted RBP23.62■■□□□ 1.37
LDB1-202ENST00000425280 MED13Q9UHV7 2174 aa23.62■■□□□ 1.37
LDB1-202ENST00000425280 IGHV3-15A0A0B4J1V0 119 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 TRAV1-2A0A0B4J238 106 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 LOC110117498-PIK3R3F6TDL0 507 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 H0YC42 278 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 TBX1O43435 398 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 TRAPPC6AO75865 159 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 CFL1P23528 166 aaKnown RBP23.61■■□□□ 1.37
LDB1-202ENST00000425280 GDF1P27539 372 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 PCK2Q16822 640 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 WIPI1Q5MNZ9 446 aaPredicted RBP23.61■■□□□ 1.37
LDB1-202ENST00000425280 GLB1L2Q8IW92 636 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 OR2M7Q8NG81 312 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 OR2G2Q8NGZ5 317 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 UCN2Q96RP3 112 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 NAA11Q9BSU3 229 aaPredicted RBP23.61■■□□□ 1.37
LDB1-202ENST00000425280 ABCB10Q9NRK6 738 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 COMMD3Q9UBI1 195 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 WNT11O96014 354 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 CLDN20P56880 219 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 OR10A3P58181 314 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 TEX30Q5JUR7 227 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 CARD17Q5XLA6 110 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 DCDC5Q6ZRR9 648 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 OR5AK2Q8NH90 309 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 SFXN2Q96NB2 322 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 SDHCQ99643 169 aaPredicted RBP23.61■■□□□ 1.37
LDB1-202ENST00000425280 HES7Q9BYE0 225 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 PTPRBP23467 1997 aa23.61■■□□□ 1.37
LDB1-202ENST00000425280 ARL6IP5O75915 188 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 HRGP04196 525 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 HBMQ6B0K9 141 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 KCTD18Q6PI47 426 aaPredicted RBP23.6■■□□□ 1.37
LDB1-202ENST00000425280 SPATC1Q76KD6 591 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 CENPSQ8N2Z9 138 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 MROQ9BYG7 248 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 SRXN1Q9BYN0 137 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 A0A0G2JK05 382 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 OR4C45A6NMZ5 311 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 CLDN17P56750 224 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 ZNF181Q2M3W8 571 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 GGNQ86UU5 652 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 PRSS35Q8N3Z0 413 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 OR52N5Q8NH56 324 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 PHYHIPQ92561 330 aa23.6■■□□□ 1.37
LDB1-202ENST00000425280 COL25A1Q9BXS0 654 aaPredicted RBP23.6■■□□□ 1.37
LDB1-202ENST00000425280 CNTRLQ7Z7A1 2325 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 hCG_2014768A0A024R1R8 64 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 ZNF726A6NNF4 738 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 ZNF879B4DU55 563 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 AQP8O94778 261 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 AGFG1P52594 562 aaKnown RBP23.59■■□□□ 1.37
LDB1-202ENST00000425280 PPP3R1P63098 170 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 FDX2Q6P4F2 183 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 KRT77Q7Z794 578 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 VASH2Q86V25 355 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 LYSMD2Q8IV50 215 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 GALNT16Q8N428 558 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 C11orf40Q8WZ69 217 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 KIAA1549Q9HCM3 1950 aa23.59■■□□□ 1.37
LDB1-202ENST00000425280 VAMP5O95183 116 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 LAP3P28838 519 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 MAGEB1P43366 347 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 POU4F3Q15319 338 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 HIST3H3Q16695 136 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 IDNKQ5T6J7 187 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 SLC25A47Q6Q0C1 308 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 CREB3L2Q70SY1 520 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 LINC00346Q8IVM7 164 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 RNF128Q8TEB7 428 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 C4orf45Q96LM5 186 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 DCBLD2Q96PD2 775 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 NOX4Q9NPH5 578 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 DAPK2Q9UIK4 370 aa23.58■■□□□ 1.37
LDB1-202ENST00000425280 CACNA1CQ13936 2221 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms