RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 PWWP2BQ6NUJ5 590 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CDC20BQ86Y33 519 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 EXD3Q8N9H8 876 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FCAMRQ8WWV6 532 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 NKX3-1Q99801 234 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 C7orf50Q9BRJ6 194 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 TBL1XR1Q9BZK7 514 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CHIAQ9BZP6 476 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 KCNG2Q9UJ96 466 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 MRTO4Q9UKD2 239 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 CNOT1A5YKK6 2376 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 TRAV8-7A0A075B6U6 113 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FRG2CA6NGY1 282 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 H0YC42 278 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ARPC1BO15143 372 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 SCRG1O75711 98 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 SLC25A12O75746 678 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 SSTR2P30874 369 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ART1P52961 327 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 DYRK1AQ13627 763 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FAM109AQ8N4B1 249 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 OR2G2Q8NGZ5 317 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 TMEM106AQ96A25 262 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 KLHL15Q96M94 604 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 INTS14Q96SY0 518 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 AMELYQ99218 206 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 EXOSC3Q9NQT5 275 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 CTSFQ9UBX1 484 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FOXJ3Q9UPW0 622 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FITM1A5D6W6 292 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ATP6V1G2-DDX39BF2Z307 99 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CTDSPLO15194 276 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 DDAH2O95865 285 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ABHD16AO95870 558 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FBXO45P0C2W1 286 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CCL4P13236 92 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 APEHP13798 732 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 FBLP22087 321 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 MAPK3P27361 379 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 DCTDP32321 178 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ADH7P40394 386 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 PTH2RP49190 550 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 PLA2G7Q13093 441 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CLVS2Q5SYC1 327 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 FAM69BQ5VUD6 431 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 SLC25A25Q6KCM7 469 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 LRRN1Q6UXK5 716 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ZNF767PQ75MW2 155 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ZNF721Q8TF20 911 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 TSEN15Q8WW01 171 aaKnown RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 METTL21AQ8WXB1 218 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 LOXL4Q96JB6 756 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 CCNL2Q96S94 520 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 COMMD4Q9H0A8 199 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 TAS2R10Q9NYW0 307 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 AKAP7Q9P0M2 348 aaPredicted RBP9.63□□□□□ -0.87
CUX1-205ENST00000425244 RARRES3Q9UL19 164 aa9.63□□□□□ -0.87
CUX1-205ENST00000425244 ZFHX4Q86UP3 3567 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 PRR33A8MZF0 331 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 GABARAPH6UMI1 98 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 CDC40O60508 579 aaKnown RBP eCLIP9.62□□□□□ -0.87
CUX1-205ENST00000425244 PSMB1P20618 241 aaKnown RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 OR3A3P47888 321 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 P2RX1P51575 399 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 EFNA3P52797 238 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 AP2S1P53680 142 aaPredicted RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 AP3S2P59780 193 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 ACY1Q03154 408 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 KMT5CQ86Y97 462 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 C9orf40Q8IXQ3 194 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 OR11G2Q8NGC1 345 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 RPS4Y2Q8TD47 263 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 ADIPOR1Q96A54 375 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 SEC22CQ9BRL7 303 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 TRAF4Q9BUZ4 470 aaPredicted RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 LAT2Q9GZY6 243 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 CDCP1Q9H5V8 836 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 EIF3KQ9UBQ5 218 aaKnown RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 MKL2Q9ULH7 1088 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 PTPRZ1P23471 2315 aaPredicted RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 A0A1B0GX78 115 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 OR4C45A6NMZ5 311 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 IGKV3-11P04433 115 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 SPARCP09486 303 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 ALOX5APP20292 161 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 DNASE1P24855 282 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 GALNSP34059 522 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 ZNF81P51508 661 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 SNTA1Q13424 505 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 EBPQ15125 230 aaKnown RBP9.62□□□□□ -0.87
CUX1-205ENST00000425244 OR5M10Q6IEU7 315 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 Q6ZTK2 550 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 PPP1R3BQ86XI6 285 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 CARFQ8N187 725 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 OR2T35Q8NGX2 323 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 OR10Z1Q8NGY1 313 aa9.62□□□□□ -0.87
CUX1-205ENST00000425244 LIPHQ8WWY8 451 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 391.1 ms