RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 MYOZ1Q9NP98 299 aaPredicted RBP13.98□□□□□ -0.17
DDR1-234ENST00000424544 ZNF224Q9NZL3 707 aa13.98□□□□□ -0.17
DDR1-234ENST00000424544 NKX1-2Q9UD57 310 aaPredicted RBP13.98□□□□□ -0.17
DDR1-234ENST00000424544 FBXO9Q9UK97 447 aaPredicted RBP13.98□□□□□ -0.17
DDR1-234ENST00000424544 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.98□□□□□ -0.177e-8■■■□□ 17.9
DDR1-234ENST00000424544 LRRN3E7EW58 273 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 G3V2T6 193 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 M0R3G1 203 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 ATP6V1G2O95670 118 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 ZNF35P13682 527 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 CBLP22681 906 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 IFNGR2P38484 337 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 IDH3GP51553 393 aaPredicted RBP13.97□□□□□ -0.17
DDR1-234ENST00000424544 UGT2B15P54855 530 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 PRKCDQ05655 676 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 SEC23BQ15437 767 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 MDP1Q86V88 176 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 ZDHHC13Q8IUH4 622 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 CDK20Q8IZL9 346 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 SVOPLQ8N434 492 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 OR4K5Q8NGD3 323 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 KCNS3Q9BQ31 491 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 MED29Q9NX70 200 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 PDP1Q9P0J1 537 aaPredicted RBP13.97□□□□□ -0.17
DDR1-234ENST00000424544 CDC42EP3Q9UKI2 254 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 NOX1Q9Y5S8 564 aa13.97□□□□□ -0.17
DDR1-234ENST00000424544 IGHV4-61A0A0C4DH41 118 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 AKAP8O43823 692 aaKnown RBP13.96□□□□□ -0.17
DDR1-234ENST00000424544 OR10H3O60404 316 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 MT-ATP6P00846 226 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 IFNA2P01563 188 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 ZNF23P17027 643 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 PRKACGP22612 351 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 GIFP27352 417 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 THBS2P35442 1172 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 PUDPQ08623 228 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 ZP4Q12836 540 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 PMS2P3Q13401 168 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 MSMPQ1L6U9 139 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 NRMQ8IXM6 262 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 OR10G2Q8NGC3 310 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 NOX3Q9HBY0 568 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 MEPEQ9NQ76 525 aaPredicted RBP13.96□□□□□ -0.17
DDR1-234ENST00000424544 TAS2R5Q9NYW4 299 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 FKBP7Q9Y680 259 aa13.96□□□□□ -0.17
DDR1-234ENST00000424544 SAC3D1A6NKF1 404 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 KPNA4O00629 521 aaPredicted RBP13.95□□□□□ -0.18
DDR1-234ENST00000424544 IGF2P01344 180 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 HLA-HP01893 362 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 IFI30P13284 250 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 ANXA8P13928 327 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 ZNF14P17017 642 aaPredicted RBP13.95□□□□□ -0.18
DDR1-234ENST00000424544 NPR2P20594 1047 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 NR4A1P22736 598 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 GZMKP49863 264 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 POU3F1Q03052 451 aaPredicted RBP13.95□□□□□ -0.18
DDR1-234ENST00000424544 LAPTM4AQ15012 233 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 ZNF74Q16587 644 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 C1orf94Q6P1W5 598 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 LRFN4Q6PJG9 635 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 VHLLQ6RSH7 139 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 ZER1Q7Z7L7 766 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 HS3ST5Q8IZT8 346 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 ZNF540Q8NDQ6 660 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 OR5J2Q8NH18 312 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 PFN4Q8NHR9 129 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 GNPDA2Q8TDQ7 276 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 TMEM54Q969K7 222 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 MSI2Q96DH6 328 aaKnown RBP13.95□□□□□ -0.18
DDR1-234ENST00000424544 VRK1Q99986 396 aaPredicted RBP13.95□□□□□ -0.18
DDR1-234ENST00000424544 C9orf16Q9BUW7 83 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 ASPNQ9BXN1 380 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 RAB1BQ9H0U4 201 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 KRCC1Q9NPI7 259 aaPredicted RBP13.95□□□□□ -0.18
DDR1-234ENST00000424544 OAZ3Q9UMX2 235 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 TMEM5Q9Y2B1 443 aa13.95□□□□□ -0.18
DDR1-234ENST00000424544 ARRDC5A6NEK1 342 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 VSTM5A8MXK1 200 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 PIP5K1CO60331 668 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 LMX1BO60663 402 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 GASTP01350 101 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 OMPP47874 163 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 EVX1P49640 407 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 CAMK2DQ13557 499 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 TRIP10Q15642 601 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 CARD17Q5XLA6 110 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 ZNF770Q6IQ21 691 aaPredicted RBP13.94□□□□□ -0.18
DDR1-234ENST00000424544 PGBD2Q6P3X8 592 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 ZBTB49Q6ZSB9 765 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 TMPRSS11FQ6ZWK6 438 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 SLC46A3Q7Z3Q1 461 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 ZCCHC24Q8N2G6 241 aaKnown RBP13.94□□□□□ -0.18
DDR1-234ENST00000424544 C10orf53Q8N6V4 93 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 OR6X1Q8NH79 312 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 NEU4Q8WWR8 484 aaPredicted RBP13.94□□□□□ -0.18
DDR1-234ENST00000424544 EME1Q96AY2 570 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 BPIFA2Q96DR5 249 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 SGTBQ96EQ0 304 aa13.94□□□□□ -0.18
DDR1-234ENST00000424544 MS4A3Q96HJ5 214 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms