RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 SSR4P51571 173 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 SNRPD2P62316 118 aaKnown RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 TLE3Q04726 772 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 PLPPR5Q32ZL2 321 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 PYDC2Q56P42 97 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 TRIQKQ629K1 86 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 METAP1DQ6UB28 335 aaPredicted RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 TEX261Q6UWH6 196 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 RPS19BP1Q86WX3 136 aaKnown RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 CDC20BQ86Y33 519 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 TMEM156Q8N614 296 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 C19orf18Q8NEA5 215 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 OR2M3Q8NG83 312 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 ZNF519Q8TB69 540 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 RELTQ969Z4 430 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 FAM122AQ96E09 287 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 DDA1Q9BW61 102 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 CDCP1Q9H5V8 836 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 ZNF160Q9HCG1 818 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 CHST11Q9NPF2 352 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 NPIPA1Q9UND3 350 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 B9D1Q9UPM9 204 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 R4GN57 208 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 U3KQ87 197 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 ALPK2Q86TB3 2170 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 VPS13AQ96RL7 3174 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 CPAMD8Q8IZJ3 1885 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 FAM25EA8MYX2 175 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 H3BML4 177 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 I3L521 148 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 DCTN6O00399 190 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 SLC16A7O60669 478 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 NCR1O76036 304 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 CELA2AP08217 269 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 RAB40ALP0C0E4 278 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 FAM157BP0CG42 384 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 OTX2P32243 289 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 PLA2G5P39877 138 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 PSMB10P40306 273 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 RPS15P62841 145 aaKnown RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 C3orf33Q6P1S2 294 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 TMEM81Q6P7N7 255 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 DNM1P34Q6PK57 102 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 PXKQ7Z7A4 578 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 THEM6Q8WUY1 208 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 PHYHIPQ92561 330 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 AKAP1Q92667 903 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNX20-203ENST00000423026 KCTD12Q96CX2 325 aaKnown RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 ARL5BQ96KC2 179 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 CDC6Q99741 560 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 NPAS1Q99742 590 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 ATF6BQ99941 703 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 PPA2Q9H2U2 334 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 MIXL1Q9H2W2 232 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 RANBP3Q9H6Z4 567 aaPredicted RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 MCUBQ9NWR8 336 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 ALKBH4Q9NXW9 302 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 VSX1Q9NZR4 365 aaPredicted RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 IKZF2Q9UKS7 526 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 ING4Q9UNL4 249 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 FARSAQ9Y285 508 aaKnown RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 B3GALT5Q9Y2C3 310 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 CHCHD2Q9Y6H1 151 aaPredicted RBP8.12□□□□□ -1.11
SNX20-203ENST00000423026 EML6Q6ZMW3 1958 aa8.12□□□□□ -1.11
SNX20-203ENST00000423026 A0A087WZY1 265 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 FAM240BA0A1B0GVZ2 78 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 SLC22A23A1A5C7 686 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 LIPT2A6NK58 231 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 HSPB2A8KAH6 182 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 MS4A18H0YCH9 400 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 PSMD9O00233 223 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
SNX20-203ENST00000423026 SLC19A2O60779 497 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 SC5DO75845 299 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 ARSBP15848 533 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 ADH6P28332 368 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 INSM1Q01101 510 aaPredicted RBP8.11□□□□□ -1.11
SNX20-203ENST00000423026 EGR3Q06889 387 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 SSPNQ14714 243 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 HSPB2Q16082 182 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 MS4A18Q3C1V0 323 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 IDNKQ5T6J7 187 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 PRAMEF20Q5VT98 475 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 SLC22A10Q63ZE4 541 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 HBMQ6B0K9 141 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 TMEM65Q6PI78 240 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 LINC00518Q8N0U6 118 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 ZNF680Q8NEM1 530 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 SLC25A43Q8WUT9 341 aaPredicted RBP8.11□□□□□ -1.11
SNX20-203ENST00000423026 CREB3L1Q96BA8 519 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 LIN37Q96GY3 246 aaPredicted RBP8.11□□□□□ -1.11
SNX20-203ENST00000423026 RNF32Q9H0A6 362 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 IFT22Q9H7X7 185 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 HPF1Q9NWY4 346 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 TCFL5Q9UL49 500 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 ZNF281Q9Y2X9 895 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 BDP1A6H8Y1 2624 aa8.11□□□□□ -1.11
SNX20-203ENST00000423026 TRAV1-2A0A0B4J238 106 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms