RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 A0A096LPE4 126 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 A0A1W2PPL8 197 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 A0A1W2PPZ6 126 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 FAM183AA6NL82 134 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 PRKYO43930 277 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 PAICSP22234 425 aaKnown RBP14.88□□□□□ -0.03
COL7A1-202ENST00000422991 CDAP32320 146 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 GGT2P36268 569 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 PTDSS1P48651 473 aaKnown RBP14.88□□□□□ -0.03
COL7A1-202ENST00000422991 NRN1LQ496H8 165 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 TIMM23BQ5SRD1 257 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 C22orf34Q6ZV56 151 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 P2RY8Q86VZ1 359 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 GLB1L2Q8IW92 636 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 DMRTC2Q8IXT2 367 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-202ENST00000422991 OR2T4Q8NH00 348 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 HTRA1Q92743 480 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 HCAR1Q9BXC0 346 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 RERGLQ9H628 205 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 MED20Q9H944 212 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 SRA1Q9HD15 236 aaKnown RBP14.88□□□□□ -0.03
COL7A1-202ENST00000422991 HINT3Q9NQE9 182 aaKnown RBP14.88□□□□□ -0.03
COL7A1-202ENST00000422991 FAM118AQ9NWS6 357 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 B9D1Q9UPM9 204 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 COA3Q9Y2R0 106 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-202ENST00000422991 CENPEQ02224 2701 aa14.88□□□□□ -0.03
COL7A1-202ENST00000422991 ARPC4-TTLL3A0A0A6YYG9 625 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 SH3D21A4FU49 640 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 TUBAL3A6NHL2 446 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 PRR23D1E9PI22 279 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-202ENST00000422991 SLC16A6O15403 523 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 THBDP07204 575 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 PRR23D2P0DMB1 279 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-202ENST00000422991 GAAP10253 952 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 SPI1P17947 270 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 HOXC12P31275 282 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 PYCR1P32322 319 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 CDC42P60953 191 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 EFNB1P98172 346 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 TAB1Q15750 504 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 FBXW10Q5XX13 1052 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 PLBD1Q6P4A8 553 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 CXXC5Q7LFL8 322 aaKnown RBP14.87□□□□□ -0.03
COL7A1-202ENST00000422991 CPOQ8IVL8 374 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 SLC22A24Q8N4F4 322 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 WDR31Q8NA23 367 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 PROKR2Q8NFJ6 384 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 FAM81AQ8TBF8 368 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 TMEM163Q8TC26 289 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 HSD17B8Q92506 261 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 FOXN4Q96NZ1 517 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 WFIKKN1Q96NZ8 548 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 MED18Q9BUE0 208 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 VCX3BQ9H321 246 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 POLE4Q9NR33 117 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 NDRG3Q9UGV2 375 aa14.87□□□□□ -0.03
COL7A1-202ENST00000422991 CELSR2Q9HCU4 2923 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 LOC100130705A0A1B0GUX0 176 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 H0YJX3 145 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 GYPBP06028 91 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 OR8G3PP0DMU2 310 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 CLUP10909 449 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 HOXB1P14653 301 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-202ENST00000422991 NPR2P20594 1047 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 COL8A1P27658 744 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 LAP3P28838 519 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 GLO1Q04760 184 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 KEAP1Q14145 624 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 C1QTNF12Q5T7M4 302 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 SEZ6L2Q6UXD5 910 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 MEX3BQ6ZN04 569 aaKnown RBP14.86□□□□□ -0.03
COL7A1-202ENST00000422991 SKA3Q8IX90 412 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 CCDC36Q8IYA8 594 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 TCEANCQ8N8B7 351 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 ZNF555Q8NEP9 628 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 BBS1Q8NFJ9 593 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 OR52N5Q8NH56 324 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 LINC01560Q8TB33 94 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 ZNRF4Q8WWF5 429 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 PTP4A1Q93096 173 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 OTULINQ96BN8 352 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 SPOCK3Q9BQ16 436 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 SEC61A2Q9H9S3 476 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 SIAEQ9HAT2 523 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 OBP2BQ9NPH6 170 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 ZNF224Q9NZL3 707 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 AMDHD2Q9Y303 409 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 GMPPBQ9Y5P6 360 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 SLC25A15Q9Y619 301 aa14.86□□□□□ -0.03
COL7A1-202ENST00000422991 HRNRQ86YZ3 2850 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-202ENST00000422991 PRR14LQ5THK1 2151 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 A0A1W2PR80 420 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 ZNF503-AS2A6NEH8 195 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 FAM171A2A8MVW0 826 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 TLX2O43763 284 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-202ENST00000422991 FARS2O95363 451 aaKnown RBP14.85□□□□□ -0.03
COL7A1-202ENST00000422991 GPANK1O95872 356 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 SCG5P05408 212 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 MSR1P21757 451 aa14.85□□□□□ -0.03
COL7A1-202ENST00000422991 SLC2A5P22732 501 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms