RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PPP2R2BQ00005 443 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 CDK5Q00535 292 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDGFC-202ENST00000422544 DAG1Q14118 895 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 DAZAP2Q15038 168 aaPredicted RBP8.11□□□□□ -1.11
PDGFC-202ENST00000422544 SGCAQ16586 387 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 PGGHGQ32M88 737 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 C10orf128Q5T292 105 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 SLC27A4Q6P1M0 643 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 KLHL24Q6TFL4 600 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF627Q7L945 461 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 SKA3Q8IX90 412 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF295-AS1Q8N0V1 137 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 OR6V1Q8N148 313 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 PARP8Q8N3A8 854 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 C17orf78Q8N4C9 275 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 CBR4Q8N4T8 237 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 CYB561A3Q8NBI2 242 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 NPEPL1Q8NDH3 523 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 BOD1Q96IK1 185 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 FOXN4Q96NZ1 517 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 TSSK2Q96PF2 358 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 DDOQ99489 341 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 SLC29A1Q99808 456 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 SH3GL3Q99963 347 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 RBM4BQ9BQ04 359 aaKnown RBP8.11□□□□□ -1.11
PDGFC-202ENST00000422544 RBM4Q9BWF3 364 aaKnown RBP8.11□□□□□ -1.11
PDGFC-202ENST00000422544 NUAK2Q9H093 628 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 FN3KQ9H479 309 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 SEC61A2Q9H9S3 476 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 RPRD1BQ9NQG5 326 aaKnown RBP8.11□□□□□ -1.11
PDGFC-202ENST00000422544 TMEM38BQ9NVV0 291 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 PRR14LQ5THK1 2151 aa8.11□□□□□ -1.11
PDGFC-202ENST00000422544 ARPC4-TTLL3A0A0A6YYG9 625 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 A0A1W2PPL8 197 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF503-AS2A6NEH8 195 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 FAM171A2A8MVW0 826 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 DCTN6O00399 190 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 EI24O14681 340 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 SIAH2O43255 324 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 KHDRBS3O75525 346 aaKnown RBP8.1□□□□□ -1.11
PDGFC-202ENST00000422544 HLA-HP01893 362 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 HMGN1P05114 100 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 ALPLP05186 524 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 SCG5P05408 212 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 PATE4P0C8F1 98 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 OR8G3PP0DMU2 310 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 CD79AP11912 226 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 CRYGSP22914 178 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 EPHA2P29317 976 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 GRK5P34947 590 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 CAPZA2P47755 286 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 CENPAP49450 140 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF83P51522 516 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 ALDH3A2P51648 485 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 ESRRGP62508 458 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 PIGFQ07326 219 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 CRMP1Q14194 572 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 PTGES3Q15185 160 aaKnown RBP8.1□□□□□ -1.11
PDGFC-202ENST00000422544 LRRC36Q1X8D7 754 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 OTPQ5XKR4 325 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 SEZ6L2Q6UXD5 910 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 ZBTB49Q6ZSB9 765 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 SLC22A24Q8N4F4 322 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 SLC37A3Q8NCC5 494 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 FGFBP3Q8TAT2 258 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 EME1Q96AY2 570 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 C9orf16Q9BUW7 83 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 RIBC2Q9H4K1 309 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 SIAEQ9HAT2 523 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 TVP23BQ9NYZ1 205 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 USE1Q9NZ43 259 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 KLHL21Q9UJP4 597 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 B9D1Q9UPM9 204 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-202ENST00000422544 AMDHD2Q9Y303 409 aa8.1□□□□□ -1.11
PDGFC-202ENST00000422544 IGLV1-36A0A0B4J1U3 117 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 DPRXA6NFQ7 191 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 FAM183AA6NL82 134 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 A6NNC1 897 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 RIIAD1A6NNX1 92 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 DEFB108AA8MXU0 73 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 H0YHG0 523 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 M0R1B8 84 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 SURF4O15260 269 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 MPZL1O95297 269 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 FARS2O95363 451 aaKnown RBP8.09□□□□□ -1.11
PDGFC-202ENST00000422544 GPANK1O95872 356 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 WNT11O96014 354 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 IFNGP01579 166 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 NPR2P20594 1047 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 LAP3P28838 519 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 CRABP1P29762 137 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 PYCR1P32322 319 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 GUCA1AP43080 201 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-202ENST00000422544 PRSS12P56730 875 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 MRPS34P82930 218 aaKnown RBP8.09□□□□□ -1.11
PDGFC-202ENST00000422544 TLE4Q04727 773 aa8.09□□□□□ -1.11
PDGFC-202ENST00000422544 NPRL3Q12980 569 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms