RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TMEM53Q6P2H8 277 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 PTCHD4Q6ZW05 846 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 LURAP1LQ8IV03 231 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 NEUROG1Q92886 237 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 NMD3Q96D46 503 aaKnown RBP13.73□□□□□ -0.21
BRAT1-202ENST00000421712 NRBF2Q96F24 287 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 FOXN4Q96NZ1 517 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 TMEM204Q9BSN7 226 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 PLA2G12AQ9BZM1 189 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 SEMA6AQ9H2E6 1030 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 SIAEQ9HAT2 523 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 SRA1Q9HD15 236 aaKnown RBP13.73□□□□□ -0.21
BRAT1-202ENST00000421712 CCNB1IP1Q9NPC3 277 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 MOKQ9UQ07 419 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 PLEKHA6Q9Y2H5 1048 aa13.73□□□□□ -0.21
BRAT1-202ENST00000421712 CADP27708 2225 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 AKAP6Q13023 2319 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 ZNF503-AS2A6NEH8 195 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 HS3ST1O14792 307 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 CRYAAP02489 173 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 CELA3BP08861 270 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 CECR9P0C854 216 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 CDH11P55287 796 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 MRPS34P82930 218 aaKnown RBP13.72□□□□□ -0.21
BRAT1-202ENST00000421712 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.72□□□□□ -0.21
BRAT1-202ENST00000421712 ZSCAN26Q16670 478 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 SLC36A3Q495N2 470 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 NRN1LQ496H8 165 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 ZFP1Q6P2D0 407 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 DNM1P34Q6PK57 102 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 CD300LDQ6UXZ3 194 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 DPPA2Q7Z7J5 298 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 HIPK1Q86Z02 1210 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 FAM169BQ8N8A8 192 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 SDR9C7Q8NEX9 313 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 OR2T33Q8NG76 320 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 OR8D4Q8NGM9 314 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 NUAK2Q9H093 628 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 B3GNT2Q9NY97 397 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 CISD1Q9NZ45 108 aaKnown RBP13.72□□□□□ -0.21
BRAT1-202ENST00000421712 VSX1Q9NZR4 365 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-202ENST00000421712 ST6GALNAC2Q9UJ37 374 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 ITGB1BP2Q9UKP3 347 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 BAIAP2Q9UQB8 552 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 UGT2A1Q9Y4X1 527 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 NOTCH2Q04721 2471 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 FBN2P35556 2912 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 ABCA12Q86UK0 2595 aa13.72□□□□□ -0.21
BRAT1-202ENST00000421712 SHISA9B4DS77 424 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 BHLHE40O14503 412 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 MGRN1O60291 552 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 IGKV3-15P01624 115 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 RAF1P04049 648 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 CTLA4P16410 223 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 LAP3P28838 519 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 CRABP1P29762 137 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 PLP2Q04941 152 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 RAB39AQ14964 217 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 C3orf36Q3SXR2 165 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 ZNF672Q499Z4 452 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-202ENST00000421712 ZDHHC13Q8IUH4 622 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 ICA1LQ8NDH6 482 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 FGFBP3Q8TAT2 258 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 FBXW5Q969U6 566 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 NOX3Q9HBY0 568 aa13.71□□□□□ -0.21
BRAT1-202ENST00000421712 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.21
BRAT1-202ENST00000421712 CRNNQ9UBG3 495 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-202ENST00000421712 COA3Q9Y2R0 106 aaPredicted RBP13.71□□□□□ -0.21
BRAT1-202ENST00000421712 ROS1P08922 2347 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 ATP6V1G2-DDX39BF2Z307 99 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 IFNGP01579 166 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 IGLV1-44P01699 117 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 OSMP13725 252 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 MSR1P21757 451 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 NAAAQ02083 359 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 HSF2Q03933 536 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 PAMR1Q6UXH9 720 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 C20orf204Q6ZNR8 217 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-202ENST00000421712 GLB1L2Q8IW92 636 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 SVOPLQ8N434 492 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 LNX2Q8N448 690 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 IQCF1Q8N6M8 205 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 CYB561A3Q8NBI2 242 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 IL17RDQ8NFM7 739 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 OR4Q3Q8NH05 313 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 LILRB1Q8NHL6 650 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-202ENST00000421712 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
BRAT1-202ENST00000421712 MS4A3Q96HJ5 214 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 TSSK2Q96PF2 358 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 CCL19Q99731 98 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 TEX12Q9BXU0 123 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 FN3KQ9H479 309 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 PAPOLBQ9NRJ5 636 aaKnown RBP13.7□□□□□ -0.22
BRAT1-202ENST00000421712 ZNF224Q9NZL3 707 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 FBXL3Q9UKT7 428 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 ITPR2Q14571 2701 aa13.7□□□□□ -0.22
BRAT1-202ENST00000421712 APCP25054 2843 aa13.69□□□□□ -0.22
BRAT1-202ENST00000421712 SPG11Q96JI7 2443 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms